| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2229 |
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| Symbol | |
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| ID | 4039047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2444305 |
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| End bp | 2446047 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637977624 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_584377 |
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| Protein GI | 94311167 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0301867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.190368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGC GCGTGAAGTT GGGGATGTCG GCCCTGGCCT TTGCGGCCGC GCTGGCTTGC
GGTCATGCGG CCTGGGCCGA CGAGGCCTCC GCGAAGAAGT GGGTAGACAA CGAGTTCCAG
CCGTCGTCGC TGTCCAAGGA CAAGCAGATG GCGGAAATGA AGTGGTTCAT GGACGCCGCC
GCCAAGCTCA AGGCGAAGGG CGTCACCCAG ATCAACGTGG TGTCCGAAAC CATTACCACG
CACGAGTACG AATCCAAGAC GCTGGCCAAG GCCTTCGAGG AAATCACCGG CATCAAGGTC
AATCACGACA TCATCCAGGA AGGCGATGTC GTGGAAAAGC TGCAGACGTC GATGCAGTCC
GGCAAGTCGA TCTACGATGG CTGGATCTCC GACTCGGATC TGATTGGCAC GCACTACCGC
TATGGCGCGA TCCTGCCGCT GTCCGACTAC ATGACCGGCG TGGGCAAGGA GTACACGAAC
CCCGGCATCG ACATCAAGGA CTTCATCGGG ACGAAGTTCA CCACGGCGCC GGACGGCAAG
CTCTACCAGC TGCCGGATCA GCAGTTCGCC AACCTGTACT GGTTCCGCGC CGACTGGTTC
GCGCGCAAGG ATCTGCAGGA GAAGTTCAAG GCCAAGTACG GCTATGACCT GGGCGTGCCA
ACCAACTGGT CCGCCTACGA GGACATTGCC AACTTCTTCA CCAACGACGT GAAGGAACTT
GACGGCAAGA AGGTGTTTGG CCACATGGAC TATGGCAAGA AGGACCCGTC GCTCGGCTGG
CGCTTCACCG ATGCGTGGCT GTCGATGGCC GGATCGGCCG ACAAGGGGCT GCCCAATGGC
ATGCCGGTGG ACGAGTGGGG CATTCGCGTG GCCGAGGACA AGTGCACGCC GGTTGGCGCG
TCGGTCTCGC GTGGCGGCGC CACGAACAGC CCGGCCGCGG TCTACGCGCT GACCAAGTAC
ATCGACTGGA TGAAGAAGTA CGCGCCGCCG CAGGCCATGG GCATGACCTT CTCCGAGGCG
GGCCCGGTGC CTGCCCAGGG CCAGGTGGCG CAGCAGATCT TCTGGTACAC GGCGTTCACG
GCCGATATGA CCAAGAAGGG CCTGCCGGTG GTCAATGCCG ATGGCTCGCC GAAGTGGCGC
ATGGCGCCGT CGCCGTACGG CCCGTACTGG AAGCAGGGGA TGCAGAACGG CTACCAGGAC
GTCGGCTCGT GGACTTTCTT CAAGAACACC GATCCGAACC GTCTGGCTGC CGCCTGGCTC
TACGCGCAGT TCGTGACGTC CAAGACGGTG TCGCTGAAGA AATCGCTGAC CGGCCTGACC
TTTATCCGCG ACAGCGATAT TCACCACGAG TACCTGACCA AGAACGCGGA CAAGTATGGT
GGCCTGATCG AGTTCTACCG CAGCCCGGCC CGCGTGGCCT GGACGCCGAC CGGCAACAAC
GTGCCTGACT ATCCGAAGCT GGCGCAACTG TGGTGGAAGA ACGTGGCCAC TGCGGTGACG
GGCGAAAAGA CGCCTCAGGT GGCGATGGAT ACCCTGGCCG AGGAGATGGA CAACGTGATG
GGCCGCCTGC AGCGTGCTGG CATGGCGAAT TGCGCGCCGA AGCTCAATCC GAAGAGCGAT
CCGTCGAAGT GGCTGTCGTC GGAACATGCG CCGTGGAAGA AGCTGGACAA TGAAAAACCA
AAGGGCGAAA CCATCGCCTA TGACAAGCTG CTGCAGGCGT GGAAGGAAGG GCGCGTGCGC
TGA
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| Protein sequence | MKERVKLGMS ALAFAAALAC GHAAWADEAS AKKWVDNEFQ PSSLSKDKQM AEMKWFMDAA
AKLKAKGVTQ INVVSETITT HEYESKTLAK AFEEITGIKV NHDIIQEGDV VEKLQTSMQS
GKSIYDGWIS DSDLIGTHYR YGAILPLSDY MTGVGKEYTN PGIDIKDFIG TKFTTAPDGK
LYQLPDQQFA NLYWFRADWF ARKDLQEKFK AKYGYDLGVP TNWSAYEDIA NFFTNDVKEL
DGKKVFGHMD YGKKDPSLGW RFTDAWLSMA GSADKGLPNG MPVDEWGIRV AEDKCTPVGA
SVSRGGATNS PAAVYALTKY IDWMKKYAPP QAMGMTFSEA GPVPAQGQVA QQIFWYTAFT
ADMTKKGLPV VNADGSPKWR MAPSPYGPYW KQGMQNGYQD VGSWTFFKNT DPNRLAAAWL
YAQFVTSKTV SLKKSLTGLT FIRDSDIHHE YLTKNADKYG GLIEFYRSPA RVAWTPTGNN
VPDYPKLAQL WWKNVATAVT GEKTPQVAMD TLAEEMDNVM GRLQRAGMAN CAPKLNPKSD
PSKWLSSEHA PWKKLDNEKP KGETIAYDKL LQAWKEGRVR
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