| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2222 |
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| Symbol | |
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| ID | 4039040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2435897 |
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| End bp | 2437084 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637977617 |
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| Product | cytochrome c, class I |
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| Protein accession | YP_584370 |
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| Protein GI | 94311160 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000427443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.28108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGGAC CACCGGCACA GGCGTGGCTC AACACGCTGC TCACGCTGTT GCAGGACGGG
CAGCTTGCGC TATTGCGGCT CTGGCATGTG CTGCACCTCT CCGGTGACGC ACACGGCCAG
CCCGCCTGGC CGTGGGCCCG AAGAATCGCA GGGGAAACGC TGCTGATCGA TCTCGGTCTG
GCACGTCAGG TCGCGTGGAG CCTTGCGGCA ATCTCCGTGG CGCTGGCCTG CCTCGCCGTC
GCCAGCATCT GGCGGGGCAA GCGGCTGACC TGGCTCGCTG CCGCGGCGCT GACGCTTATC
CTCGCACCCT GGCCATCGCC GGCATTGTTG TTCACCCCTG CCGCTCCCAC CAGTTTTCAC
CGCAGCCCCA CCCGCTTCTC AACCGACAGC ATCGCGCATG GCGCACGCCT CTACGCGCAA
CATTGCACCG CTTGCCACGG CGAGGATGGC CGGGGTGAAG GACCGCTCGC GGCCGGGCTA
TTGCGATGGC CACCAACGTT CGTCGGCCCG TTACTGGGGC GTCGCGCCGA CGGCGATCTG
TTCTGGCATA TCGCCAATGG GATGCGCGAT AGCGACGGCC GGCAGACGAT GCCCGCTTTC
TCGCGAAAGC TCGACGATGC CGACACCTGG GCTGTCATCG AATACACCAA GGCGCTGGCA
GCCGGCACTG CCGCCAGCAC GTTCGGCACC TGGCCGATCC CAATGCGTCT GTTCGATGTC
ACGGTACGCT GCGGACAGGA TGGGGGCCGC GCGATGGCCG ACTGGCGCGG ACATCAGCGC
GTCCGAGTGG TGGCGTTCGA GGGTGATGCC GGCGGATTGC CACTGGAAGA CCCACGCTTC
CTGACATTGC TGCTGACGCG CGATGGGAAA CCGCTCGTCA ACGTCCCACA GTTTCGCGCA
GGGTGCGTCG CCGCATCACC GCTGGCCTGG GACGCATACG CCCGCATCGC CGGCATTGCC
CCCAACAGGC TGGCTGGCAC CGAGTTCCTG GCCGACCGCG GTGGCTGGCT GCGCGCGCGA
TCCCTGCCGG GCCGAGATGC GTGGGGTACC GCAGATCTGC TCTGTTCGAC CGGTCAGGTC
AACAAGGACC GTGGCCCGAC ATCGCCCGGC ACGGATGGCC TCACGTCACT GCTGTTGCGC
ATGGATGCCG AACCCGTCCG ATTCGTCCAG GGAGGCTTTA TTCACTAG
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| Protein sequence | MNGPPAQAWL NTLLTLLQDG QLALLRLWHV LHLSGDAHGQ PAWPWARRIA GETLLIDLGL
ARQVAWSLAA ISVALACLAV ASIWRGKRLT WLAAAALTLI LAPWPSPALL FTPAAPTSFH
RSPTRFSTDS IAHGARLYAQ HCTACHGEDG RGEGPLAAGL LRWPPTFVGP LLGRRADGDL
FWHIANGMRD SDGRQTMPAF SRKLDDADTW AVIEYTKALA AGTAASTFGT WPIPMRLFDV
TVRCGQDGGR AMADWRGHQR VRVVAFEGDA GGLPLEDPRF LTLLLTRDGK PLVNVPQFRA
GCVAASPLAW DAYARIAGIA PNRLAGTEFL ADRGGWLRAR SLPGRDAWGT ADLLCSTGQV
NKDRGPTSPG TDGLTSLLLR MDAEPVRFVQ GGFIH
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