| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2205 |
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| Symbol | |
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| ID | 4039022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2417370 |
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| End bp | 2419082 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977599 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_584353 |
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| Protein GI | 94311143 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.803173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.257061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTTG GTCGATTTCT GGCGGTAGTT GCGTGTGCCA CGCTGCTTGC AGCCTGCGCC
AGCACACCCA CACCGCCCGC CGGCGAATTG TCCGGCACGC CGACCGCCCT GGAATCCGGT
CCGAAGAAGG ACCCGCTCAA TACCCTCAAC AGCACCGGCC GCGCCGGCAC GTTATCCCGT
TCCACCGTCG TGAATGTCGA CCAGTCCAGC GTGGACTGGC TGCGCGGGCC GTCCAGCGAT
ATCTGGGACC GCATCCGCAA GGGTTTCGCG ATGCCCGACC TGGAAGGCAC GCTGGTCGAT
GATCGCACGC AGTGGTACGC GGCCCGCCCT GACTATATGG AGCGGATGGT GGGGCGGTCG
AGCCGCTACC TCTACCACAT CGTCGAGGAG CTCGAACGGC GCAAGATGCC GACCGAGCTG
GCCCTGCTGC CGTTCGTGGA GAGCGCATTC AATCCCCAGG CGGAATCCAC GGCCAAGGCG
GCCGGCATGT GGCAGTTCAT CCCGAGCACG GGCAAGACGT ACAACCTCAA GCAGAACATG
TTCCGCGACG AGCGGCGCGA CGTGCTGGCA TCGACCGACG CGGCCCTCGA CTATCTGCAG
CGGCTCTACG ACATGTTCGG CGACTGGCAA TTGGCGCTGG CCGCCTACAA CTGGGGCGAA
GGCGCCGTGT CGCGAGCCAT CGCGCGTAAT CAGGCCCGGG GGCTGCCCAC GGACTACGCC
AGCCTGACCA TGCCGACCGA GACGCGCTAT TACGTGCCGA AGCTCCAGGC GGTGAAGAAC
ATCATCGCCA ACCCGGCCGC GTACGGCGTC AGGCTGCCTG AGATCCCCGA TCATCCGTAC
TTCGTGACGG TCACGACCTC GCGGGATATC GACGTGGCGC TGGCTGCCAA GCTGGCCAAC
ATGCCGCTGG ACGAGTTCAA GGCGCTCAAT CCGTCGTTCA ACCGACCGGT GATCCTGGGT
GCGGCCAATC CGCAGATCCT GCTGCCGTTC GAGAACGCCG AGCGCTTCCA GTACAACCTC
AATACCTATC GTGGCGGGTT GTCGAGCTGG ACGGCGGTGA CCGTGGATAG CCGTGAACGT
GTGGAGTCGC TGGCCGCGCG GCTCAACGTG GATGTGGACA CGCTGCGCGA GATCAACCGG
ATTCCCAAGG GGATGCGCCT GAAAGCCGGT TCGACCGTCA TGATTCCGCG TACCGAGCGC
CACGACCAGG ACATCAGCGC ATCGCTGGTC GATACGGCCA TGCTGGCCGT GGAGCCAGAC
GTGCCTGACG CCAAGCGCGT CGTGGTGCGG GCGGGGCGCA AGGATACGGT GTCCACGGTG
GCGCGTCGCT ATGGCGTGTC GGTCAAGCAG GTGCAGTCGT GGAACAAGCT CTCCGGCAGC
AAGCTTGTTG CCGGCCAGAG TCTGGTGCTG ATGCTGCGTC CGAACTCCGC CGCCGCCATG
CGGGCGGAGC GCGCCGGGGA CGAAGACGAC ACGCCAGCCA AGGCCGCGCC ACATGGCAAG
TCGGGTGGCA AGACACAGGC CGTGGCAAAG TCGGAGAAAT ACGATAAGGT CGAGAAGTCG
TCGCGATCGG CCAAGGCCGA ACCCCGCAAG CGGGTGGTGG TGGAGGCCTC GCCGCACAGT
TCCACGAGCA AGTCGTCGGG CAAGTCCGCC ACGCGCGAAA GCAAGTCGTC GCCGACGCCA
GCGACCAAAT CCAAGTCGAG CCGCGCGCAG TAG
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| Protein sequence | MRFGRFLAVV ACATLLAACA STPTPPAGEL SGTPTALESG PKKDPLNTLN STGRAGTLSR
STVVNVDQSS VDWLRGPSSD IWDRIRKGFA MPDLEGTLVD DRTQWYAARP DYMERMVGRS
SRYLYHIVEE LERRKMPTEL ALLPFVESAF NPQAESTAKA AGMWQFIPST GKTYNLKQNM
FRDERRDVLA STDAALDYLQ RLYDMFGDWQ LALAAYNWGE GAVSRAIARN QARGLPTDYA
SLTMPTETRY YVPKLQAVKN IIANPAAYGV RLPEIPDHPY FVTVTTSRDI DVALAAKLAN
MPLDEFKALN PSFNRPVILG AANPQILLPF ENAERFQYNL NTYRGGLSSW TAVTVDSRER
VESLAARLNV DVDTLREINR IPKGMRLKAG STVMIPRTER HDQDISASLV DTAMLAVEPD
VPDAKRVVVR AGRKDTVSTV ARRYGVSVKQ VQSWNKLSGS KLVAGQSLVL MLRPNSAAAM
RAERAGDEDD TPAKAAPHGK SGGKTQAVAK SEKYDKVEKS SRSAKAEPRK RVVVEASPHS
STSKSSGKSA TRESKSSPTP ATKSKSSRAQ
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