Gene Rmet_2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2194 
Symbol 
ID4039011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2404160 
End bp2404831 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content64% 
IMG OID637977588 
Productleucine export protein LeuE 
Protein accessionYP_584342 
Protein GI94311132 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.250499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.121922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT TCATGCATGC CAACCTCGGC ATCACTGATT TCTGGACCTT TGTGCTCGGT 
ACGATCTTCA TCGTACTGCT GCCGGGGCCG AATTCGATGT ATGTGCTGTC GGTGGCCGCG
CAGCGCGGTG TGCGCGCCGG CTACAAGGGG GCATGCGGCG TTTTCCTCGG CGATGCGATC
CTGATGGTGC TGTCGGCCGC TGGCGTGGCA TCGCTGCTGA AGGCCAGCCC GGGGCTGTTC
CACGTCGTCA AGTACGTGGG TGCGGCATAC CTGGCCTGGA TCGGCTTCCA GATGCTGCGT
GGCGCGGTGC GTAACTGGTC GGCGCAAGCC GATGTCGCCA CGAACGCGGT TGCGTCGCTG
GATCGCGCGT CGAACCCGTT CAGCAAGGCG CTGTTCATCA GCCTGCTGAA CCCGAAGGCC
ATCCTGTTCT TCATCTCGTT CTTCATCCAG TTCGTGGACC CGCAGTTCGT CGTTCCGGCG
CTGTCGTTCG TGGCGCTGGG CCTGGTCTGC CAGATCTGCA GCTTCGCCTA CCTGACCACG
ATCATCTTCG TGGGCGCAAG GCTGGCCGAT GCGTTCCGCC GCCGCCGACG CCTGTCCGCA
GGTATGTCGA GCGGGGTCGG GGCGATGTTC ATCGGCTTCG GCGCCAAGCT GGCCACGGCC
ACACTGGGCT GA
 
Protein sequence
MNAFMHANLG ITDFWTFVLG TIFIVLLPGP NSMYVLSVAA QRGVRAGYKG ACGVFLGDAI 
LMVLSAAGVA SLLKASPGLF HVVKYVGAAY LAWIGFQMLR GAVRNWSAQA DVATNAVASL
DRASNPFSKA LFISLLNPKA ILFFISFFIQ FVDPQFVVPA LSFVALGLVC QICSFAYLTT
IIFVGARLAD AFRRRRRLSA GMSSGVGAMF IGFGAKLATA TLG