| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2187 |
|---|
| Symbol | |
|---|
| ID | 4039004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2395138 |
|---|
| End bp | 2396007 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637977581 |
|---|
| Product | dihydropteroate synthase |
|---|
| Protein accession | YP_584335 |
|---|
| Protein GI | 94311125 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0294] Dihydropteroate synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01496] dihydropteroate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.999142 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.35895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCGACTG AGTTCTTCCA GTGCGGGCGC TATCGTTTTT CCCGCCGCCG CCGCCCACTC
GTGATGGGTA TTCTCAATGT GACCCCTGAT TCGTTCTCAG ATGGCGGGCA GCACGCCACC
CGTGACGCCG CGCTGCGCCA TGCGGAGCAA TTGATTGCGG AGGGTGTCGA CATCATCGAT
ATCGGTGGGG AGTCCAGCCG ACCTGGGTCG GCCGCGCTGC CGCTCGATCA GGAACTAGAT
CGCGTGATGC CGATCGTCGA GTCGCTGGCC GATTGCGGTA AGCCGCTTTC GATCGACACC
TACAAGCCGG AGGTTATGCG TGCAGCGCTG GCGGGCGGAG CAGATCTGAT CAATGATATC
TGGGGCTTCC GAATGCCGGG TGCGGTTGAG GCAGTTGCCG CAGGGCAGTT CGGACTATGC
GTCATGCATA TGCAGCGTGA TCCCCAGACG ATGCAGGAAG ATCCGCACTA CACCGATGTG
GTTGCCGAGG TGGCATCTTT CCTGGAAGAA CGGGTGTCAA CCCTGCGTGC GGCGGGCATC
GACACGGCAC GTATTTCCCT TGATCCAGGT TTTGGATTTG GCAAGACTCC AGATCATAAT
CTGAGGTTGC TCGGACAATT ACCTAGCCTT GCTGTTGATG GCCTGCCGAT CCTGGTGGGT
CTGTCGCGCA AATCGACGCT GGGTGCAATC ATCGGCGGCA AACCTCCACA GGCGCGCGTA
GCTGCCAGTG TGGCGGCAGC CGTGTGCGCA GCTGAGCGCG GCGCATATAT CGTCCGGGTA
CATGATGTTG AACAAACAGT GGACGCCCTC AAGGTGTGGT GGGCCGTCCG CCAAGAATCA
GTTGCCCCCG ATGGGCAACA CGGAGAATGA
|
|---|
| Protein sequence | MSTEFFQCGR YRFSRRRRPL VMGILNVTPD SFSDGGQHAT RDAALRHAEQ LIAEGVDIID
IGGESSRPGS AALPLDQELD RVMPIVESLA DCGKPLSIDT YKPEVMRAAL AGGADLINDI
WGFRMPGAVE AVAAGQFGLC VMHMQRDPQT MQEDPHYTDV VAEVASFLEE RVSTLRAAGI
DTARISLDPG FGFGKTPDHN LRLLGQLPSL AVDGLPILVG LSRKSTLGAI IGGKPPQARV
AASVAAAVCA AERGAYIVRV HDVEQTVDAL KVWWAVRQES VAPDGQHGE
|
|---|
| |