Gene Rmet_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2140 
SymbolgltX 
ID4038955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2330543 
End bp2331940 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content63% 
IMG OID637977532 
Productglutamyl-tRNA synthetase 
Protein accessionYP_584288 
Protein GI94311078 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.04672e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAC GCGTCCGCAC CCGCTTCGCA CCGAGTCCGA CCGGCTTCAT TCACCTCGGC 
AATATTCGCT CCGCGTTTTA TCCGTGGGCG TTTGCCCGCC GCATGAAGGG CGACTTCATC
CTGCGTATCG AGGATACCGA CGTCGAGCGT TCGACCGATG TCGCCGTCGA CGTCATCCTG
GAAAGCATGG CCTGGCTCGA TCTGGACATC GACGAAGGCC CCTTCTATCA GATGCAGCGG
ATGGACCGGT ATCGCGAGGT GGTACAGCAG ATGCTCGACA ACGAGCTGGC TTACCACTGC
TATATGAGTA CCGAGGAGCT TGACGCCTTG CGCGAAGCGC AGCGTGCTGC TGGCGAAAAG
CCGCGGTACA ACGGTTTCTG GCGTCCGGAG CCGGGCAAGG TGCTGCCCGA GCCGCCGGCT
GGCGTGCAGC CCGTGGTGCG CTTCAAAAAC CCGATCGGCG GTAGCGTGGT GTGGGACGAC
GCCGTGAAGG GCCGCATCGA GATCTCGAAT GATGAACTCG ACGATCTCGT CATTGCCCGC
CCCGATGGCA CGCCGACCTA CAACTTCTGC GTGGTGGTGG ATGACCTCGA CATGAAGATC
ACCCACGTGA TCCGGGGCGA TGACCACGTC AATAACACGC CGCGGCAGAT CAACATCATC
CGCGCCCTGG GTGGCGAGGT GCCGGTCTAC GCCCACCTGC CCACCGTGCT CAACGAGCAG
GGTGAGAAGA TGAGTAAGCG TCATGGCGCG TTGCCCGTCA CGGGATATCG GGATGAGGGC
TATCTGCCGG AGGCGGTCCT GAACTATCTG GCGCGACTGG GCTGGGCGCA TGGCGATGCC
GAGATCTTCT CGCGCGAACA GTTCGTCGAA TGGTTCGATC TGGAGCACTT GGGCAAGTCC
CCGGCGCAAT ACAACCCGGA AAAGCTGGCG TGGCTCAACA ACCATTACAT CAAGGTTGGT
GACAACACGC GCCTGGCAGA CCTGACGCGT CCGTTCATCG AGGCGCTCGG CGGCAAGGTC
GAAGGCGCGA ACCTGGTGGA CGTGATCGCG CTGGTCAAGG ATCGCGCGAA CACGCTGAAG
GAAGTGGCGC AGACCGCGAT GCTGTTTTAT CGCGGCGAGC CGCAGGCCGA TGCGGCGCTG
AAGGCCGAAC ACCTGACGGA CGAGATTCGC CCCGCACTGC AGGCGCTGGC CACGCAACTC
GCGGCGCTGC CGGAGTGGAA GCGCGAAGCG ATCAGTGCCG CGTTCAAGGC AGTGCTGGCG
GAGTTCGGTC TGAAGATGCC GAAGCTGGCG ATGCCGGTGC GCCTGCTGGT GGCGGGACAG
TTGCAGACGC CGAGCATCGA CGCGGTGCTT GAACTGTTCG GTCGCGACAC GGTGCTGCGC
CGTTTGGCTG CAGCGTAA
 
Protein sequence
MTQRVRTRFA PSPTGFIHLG NIRSAFYPWA FARRMKGDFI LRIEDTDVER STDVAVDVIL 
ESMAWLDLDI DEGPFYQMQR MDRYREVVQQ MLDNELAYHC YMSTEELDAL REAQRAAGEK
PRYNGFWRPE PGKVLPEPPA GVQPVVRFKN PIGGSVVWDD AVKGRIEISN DELDDLVIAR
PDGTPTYNFC VVVDDLDMKI THVIRGDDHV NNTPRQINII RALGGEVPVY AHLPTVLNEQ
GEKMSKRHGA LPVTGYRDEG YLPEAVLNYL ARLGWAHGDA EIFSREQFVE WFDLEHLGKS
PAQYNPEKLA WLNNHYIKVG DNTRLADLTR PFIEALGGKV EGANLVDVIA LVKDRANTLK
EVAQTAMLFY RGEPQADAAL KAEHLTDEIR PALQALATQL AALPEWKREA ISAAFKAVLA
EFGLKMPKLA MPVRLLVAGQ LQTPSIDAVL ELFGRDTVLR RLAAA