| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2132 |
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| Symbol | |
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| ID | 4038941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2319011 |
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| End bp | 2321941 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637977518 |
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| Product | DNA helicase/exodeoxyribonuclease V subunit B |
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| Protein accession | YP_584280 |
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| Protein GI | 94311070 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3893] Inactivated superfamily I helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.687537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGAC TCTCGTTTCC TCCCGGGCCG TCCTTTCTCG ATCAGGCTGC CACGGCGACT
TGGTATTTCC TGGATCACTG CGGCCCGGCT GCCACTGGCG CGCATATCGT CGTGCCGACG
GCCGCGCAGA TTCCTGGCGT GCGCCAGGCG CTGGATGCCG CTGCGCGCGC CGCCGGGCAG
CCCCGTTTGC TACCGCGTGT GCTGACGCTC GGGCACTGGC TGCTGGACCT TCCCCCCGAT
CTTGCTGCCG ACCCGACACC CACGCGTGGC CATGCCGCGC GCCTATTGGC GGTGCAACAG
GCGATTCGCT CACAGGATTG GCTGCGGACC GCCTTTGGCG CCCAGACAGA GGGGGCGGCA
TGGGGACTGG CGCAGACGCT GCTATCGATC AGTGACGAAC TGAGTGCGCG CTGGCTGGAG
GACGCGGCGA TCCGCGGAGA CGATGATCTC GAGGGCGACG ATAGCGACGA GCGGGCGGCG
CTCCTGCAAG GCGCGCTGCA ACGTACTTAT GCGCACCTGT CCGAGCGCTT TCTCGGGCAG
GAGGCGCAGA TCGTGCTTGC CTTCTGGCAA ATGCTGTCGG GGCCGGACGA CCCGCTTCCG
GCACGACGCC GGGCGCTACA GCGCATGGCG CAGCAGGTTG CAGGGCCGGT GGTCTGGATT
GGCCCGACAT CGCCGGAACC GGTTGAAGCC AGATTCCTCG AGCAGGCCGG CGAACTCGTG
CCGACGCTCG AGGTCGGCTA CGACTGGACC GGCGCATCGG AAGCGGGGGG AGAGTCCGAC
TGGTATCGGA CGCTGCTTGC GCTGTGGCCC GAGGCCCGGC GCGACGGGGA CAGTAGTGCC
GACAGCGAAC CGTTCGCGGC ACCGCCGGCC TTGCCCGCTG CGTTGTCGGC CGAATTGCCG
GCCGAACGTC CGCGTGTCCG CGTTATCGGC AGCGCGCGCT TCGAGGATGA AGCCGCCGCA
GCAGCGGACC AGCTCGTGCA ATGGCTCAAC GAAGGCCGCA GGCATGTGGC GCTCGTGGCC
CACGACCGCG TGGTGGCCCG CCGCGCCCGC GCGTTGCTGG CGCGTGCCGG AGCGCCTGTC
CGCGATGAAA CCGGCTGGAA GTTGTCGACC ACGCGCGCAG CCGCCGCGCT GATGCGCTGG
TTTGACGTGC TGGCGCGCGA TGGCGATAGC GCGGCACTGC TCGACCTGCT CAAGAGCCCG
TTTTGCCTGC CTGCATTCGA GCATCGCGGC GCGGCGATCG CGCTGATGGA GCGCCGCATC
CGTCGCGCTG TAGTTACCGG AGGCTGGGCC AGACTGGCGC ATCTGTTTGC AGAGCGTGAG
CGAGCGGCAG GCGCGCTGGT CGACGCGGAG ACGATGGAGG CCAGCGATGC CGAACTGCAG
ATTCGCGCTG CGGCTCGCAC GCTGATTGCC ACGCTGGCCG ACGAGGCCGC GCAGTGGCCA
CGGGGCCTCG CGCAACAGCC GCTCCATGTC TGGCTGGGCC GCCTCGACGC CATGCTTGAC
ACGCTCGATA TGCGTGTCGC GCTGGCTGCC GACGATGCCG GGCGGCAACT GCTGGATGCG
CTGGCGAAGC TGGGCGACTT GCCCGACGAC GAGACCGGCA GCCACGCCAC GCTGAACCAA
CAGGAGTTTC GTGCGATGCT GTCGGCATTG CTCGAATCGG TGGCTTACAA GGAGCCCTCG
GCGCAGAGCC AGTCGCGCAT CACGATCCTG CCGCTCAACG GCGCCCGGAT GCGACGGTTC
GACGGCGTGG TGGTAGTCGG CTGCGATGAC GCGCAGTTGC CGTCCAGCGC GGCTGAGTTG
ATGTTCTTCT CGAACCAGAT GCGACGCGAG CTTGGGCTCG AAGACCGCGA GGCCCGCTTT
GCCCAGCAGG CCCGGGATCT GGCCGAAGTG CTGCTCAACA ACAGCGACGT CGTGCTGACG
TGGCAACGCA TCGGCAGCCG GGGCGAGCCG CATCATGTCT CCGGCTGGAT CGAGCGGTTA
TCCGCATGTT GCGCGCGAGC GGGCACGCCG ATCGAAGCCA GCGCCACGCC CGCTCTGCAC
GATACCTTCG CGCAGCCCGC CGGAATGCCT GCGCCGGTGG CGCCCGAGCG CGTGCCAGAG
CGCTGGAGCG CGCAGGCGTA CAACACGTTG CGCCGTTGCC CCTATCAGTT CTTCGCCAGC
CGGATGCTGG GCCTTTCCGG GCTCGACACG CTCAGCGACG ACCTCGAGAA GCGCGATATC
GGCAACCTGC TGCATCGCGT GCTGCTGCAA TACCACGAGG AGATCCATGC CTCTGGCGAG
CGTGACAGCG ACCGGCGTCT GGCGCGTCTG CGGGAAATCT CGGATACCTC GTTCGGCAAG
CAGATTGCCG AGGACGGCAA TGCCATCAGC TATTACCGCC GCTGGATGGA AGTCCTGCCG
TCGTACGTGG CATGGCAGGC TGAGCGTGAG GAAGCGGGCT GGCACTGGCG CGGTGGCGAA
TTCGATGCCG GCGTGGATGT GGCGATGCCC GATGGCGTAC CGCTGCGGCT GGCCGGCCGG
ATCGACCGGC TCGACAAGGG ACCGGATGGC GCACATGCGG TGCTCGATTA CAAGACCCAG
CCAGCCAGCC GCCTGCGGCG CAAGGCCGGT GATGCCGAGG AAGACTGCCA GTTGGCGTTC
TACGGTCTGC TTCGGGCCGA TGCCGTGGCG GGAAGCTGGG TGGCGCTGGA AGGTGTGAAG
CAGGGCGGCC GCGATAGTTC GCCCGGTGCC CAGCGGGAAG TCGATCTGCC GGAATTTCAG
GCGGCGGTGA CTTGGCTCGA GCGCCAGTTG CGGCATGACG TCGTGCGTTT GCGGCAAGGC
GCGAAGCTGC CCGCGATCGG CGATGCCGCC GCCTGTACTT ATTGCGATGC CCGCGGCCTG
TGCCGCAAGG GCTTCTGGGA GTCCACCGCG TTGCCGGATC TGCAGTCATG A
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| Protein sequence | MTRLSFPPGP SFLDQAATAT WYFLDHCGPA ATGAHIVVPT AAQIPGVRQA LDAAARAAGQ
PRLLPRVLTL GHWLLDLPPD LAADPTPTRG HAARLLAVQQ AIRSQDWLRT AFGAQTEGAA
WGLAQTLLSI SDELSARWLE DAAIRGDDDL EGDDSDERAA LLQGALQRTY AHLSERFLGQ
EAQIVLAFWQ MLSGPDDPLP ARRRALQRMA QQVAGPVVWI GPTSPEPVEA RFLEQAGELV
PTLEVGYDWT GASEAGGESD WYRTLLALWP EARRDGDSSA DSEPFAAPPA LPAALSAELP
AERPRVRVIG SARFEDEAAA AADQLVQWLN EGRRHVALVA HDRVVARRAR ALLARAGAPV
RDETGWKLST TRAAAALMRW FDVLARDGDS AALLDLLKSP FCLPAFEHRG AAIALMERRI
RRAVVTGGWA RLAHLFAERE RAAGALVDAE TMEASDAELQ IRAAARTLIA TLADEAAQWP
RGLAQQPLHV WLGRLDAMLD TLDMRVALAA DDAGRQLLDA LAKLGDLPDD ETGSHATLNQ
QEFRAMLSAL LESVAYKEPS AQSQSRITIL PLNGARMRRF DGVVVVGCDD AQLPSSAAEL
MFFSNQMRRE LGLEDREARF AQQARDLAEV LLNNSDVVLT WQRIGSRGEP HHVSGWIERL
SACCARAGTP IEASATPALH DTFAQPAGMP APVAPERVPE RWSAQAYNTL RRCPYQFFAS
RMLGLSGLDT LSDDLEKRDI GNLLHRVLLQ YHEEIHASGE RDSDRRLARL REISDTSFGK
QIAEDGNAIS YYRRWMEVLP SYVAWQAERE EAGWHWRGGE FDAGVDVAMP DGVPLRLAGR
IDRLDKGPDG AHAVLDYKTQ PASRLRRKAG DAEEDCQLAF YGLLRADAVA GSWVALEGVK
QGGRDSSPGA QREVDLPEFQ AAVTWLERQL RHDVVRLRQG AKLPAIGDAA ACTYCDARGL
CRKGFWESTA LPDLQS
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