Gene Rmet_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2109 
Symbol 
ID4038917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2290832 
End bp2291986 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content63% 
IMG OID637977495 
Producthypothetical protein 
Protein accessionYP_584257 
Protein GI94311047 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.207444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATC TCGTCAACCT GCTCGATCTC GACGCGGACG CGCTCACTGC CTATTGCGGC 
GAGCTCGGCG AGAAGCCATT CCGTGCGCGG CAGTTGCAGC GCTGGATCCA CCAGTTTGGA
GCCAGCCACT TCGACGCCAT GACGGATCTC GCCAAATCGC TGCGCGAAAA GCTCGCGACG
CGTGCCGAGA TTCGCTCGCC CGCTGCCATT TCGGACCATA CGTCGTCCGA TGGCACGCGC
AAATGGCTGC TCGATGTGGG GGCCGGCAAC GCGGTGGAGA CGGTGTATAT CCCCGAGGAC
ACGCGCGGCA CGCTGTGTGT GTCGTCGCAG GCGGGGTGCG CCGTCAATTG CCGATTCTGT
TCGACCGGCA AGCAAGGTTT TTCGCGCAAT CTCTCCACCG GCGAGATTAT CGGCCAGCTC
TGGATGGCCG AGTTCGCGAT GCGTGCCCAG CTGGGTCGCG GCCCCAAGGA CGAGCGTGTC
ATCTCCAATG TGGTGATGAT GGGCATGGGC GAGCCGCTGC TCAACTATGA CGCGGTCGTG
CCGGCCATGC GGCTGATGCT CGATGATAAT GCGTACGGCC TGTCGCGTCG GCGCGTGACG
TTGTCCACGT CCGGCGTAGT GCCGATGATG GACCGTCTGT CGAAGGACTT GCCCGTGGCG
CTGGCGGTTT CGCTGCACGC CTCGAACGAT GCGCTGCGCG ACGTGCTCGT GCCGCTCAAC
CGCAAGTACC CGCTGGCGGA GCTGATGGCG GCTTGTCGCC GCTACCTGGA ATTCGCTCCG
CGCGACTTCA TTACTTTCGA ATACTGCATG CTCGATGGCG TCAACGATGG CGTCGAACAT
GCGCGTGAAC TGCTGAAGCT TGTGGCCGAC GTGCCTTGCA AGTTCAACCT GATTCCGTTC
AACCCGTTCC CGGAATCGGG GCTGAAGCGC TCGAACAACG AGCAGATTCG CCGCTTCGCC
CAGGTACTGA TGGATGCGGG GATTGTCACG ACGATCCGCA AAACACGTGG CGACGACATC
GACGCCGCGT GTGGCCAGCT TGCTGGCGAA GTCATGGATC GTACCCGTCT GGCCGAGCGC
GGCAAGTTCG GCAAGATCAC GCCACTGGTG CCGGTGGCTG ACGCCGGCGC CCCCCGGGAG
GCCCGTCCTG CATGA
 
Protein sequence
MNNLVNLLDL DADALTAYCG ELGEKPFRAR QLQRWIHQFG ASHFDAMTDL AKSLREKLAT 
RAEIRSPAAI SDHTSSDGTR KWLLDVGAGN AVETVYIPED TRGTLCVSSQ AGCAVNCRFC
STGKQGFSRN LSTGEIIGQL WMAEFAMRAQ LGRGPKDERV ISNVVMMGMG EPLLNYDAVV
PAMRLMLDDN AYGLSRRRVT LSTSGVVPMM DRLSKDLPVA LAVSLHASND ALRDVLVPLN
RKYPLAELMA ACRRYLEFAP RDFITFEYCM LDGVNDGVEH ARELLKLVAD VPCKFNLIPF
NPFPESGLKR SNNEQIRRFA QVLMDAGIVT TIRKTRGDDI DAACGQLAGE VMDRTRLAER
GKFGKITPLV PVADAGAPRE ARPA