| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2088 |
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| Symbol | |
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| ID | 4038895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2267396 |
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| End bp | 2268082 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637977473 |
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| Product | ribose-5-phosphate isomerase A |
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| Protein accession | YP_584236 |
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| Protein GI | 94311026 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.315604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCAGG ATGAACTCAA GGCGCTGGTC GCGCAAGCTG CCGCTGACTA TGTGAAGCAG
GAAGTGCCCG AAGGCGCCGT TCTCGGCGTG GGCACCGGCT CCACCGCCAA TCTCTTCATC
GACGCCGTGG CGGCGTTCAA GGAGCGCTTT TCGGGCGCGG TGTCGAGTTC CGAGGCCTCC
ACACGCCGCT TGCAACAGCA CGGTTTCAAT GTGCTCGATC TGAACGAGGT CGACAGCATT
CCCGTCTATG TCGACGGTGC TGACGAGATC GACAACTCGG GCGCGATGAT CAAGGGCGGC
GGCGGTGCGC TGACGCGCGA GAAGATCGTT GCCTCGGTGG CGGACCGATT CGTCTGCATT
GCCGACGGCA GCAAGCTGGT GCCGACGATG GGCGCGTTTC CGCTGCCGGT CGAGGTGATC
CCGATGGCAC GCGCAGCGGT GGCCCGTAGC CTGGCGGCAC TAGGCGGTCA GCCGCGTCTG
CGCATGACCA AGGAAGGCGG CATCTACAAG ACCGACAACG GCAACGTCAT TCTGGATGTC
TCGGGCCTGA AGATCGAGAA CCCGAAGGCG CTGGAGCAGC AAATCAACCA GCTACCCGGC
GTGGTGACCG TTGGTCTGTT CGCTCTGCGC GGAGCAAATG TGCTGTTGCT GGGTACCGAA
CAGGGCGTGC AGCGCTCGGA TTACTGA
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| Protein sequence | MTQDELKALV AQAAADYVKQ EVPEGAVLGV GTGSTANLFI DAVAAFKERF SGAVSSSEAS
TRRLQQHGFN VLDLNEVDSI PVYVDGADEI DNSGAMIKGG GGALTREKIV ASVADRFVCI
ADGSKLVPTM GAFPLPVEVI PMARAAVARS LAALGGQPRL RMTKEGGIYK TDNGNVILDV
SGLKIENPKA LEQQINQLPG VVTVGLFALR GANVLLLGTE QGVQRSDY
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