Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2048 |
Symbol | |
ID | 4038855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2216565 |
End bp | 2217989 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637977433 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_584196 |
Protein GI | 94310986 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.47477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC AATTCGACGT GCTGGTGATC GGCGCCGGCC CCGGCGGCTA TATCGCCGCC ATCCGCGCTG CCCAGTTGGG CCTGAACGTG GCTTGCCTGG AAGGCAACGC CTATGACGAT CCGAAGGGCG AAGCACGCCT GGGCGGTACC TGCCTGAACG TGGGCTGCAT TCCGTCCAAG GCACTGCTGG CTTCCTCGGA AGAGTTCGAG AACGCCTCGC ATCACCTGGC CGACCATGGC ATCACCGTGG GCGACGTCAA GGTCGACGTG GCCAAGATGC TCAAGCGCAA GGACGACATC GTCAGCAAGA TGACGAAGGG CATCGAGTTC CTGTTCCGCA AGAACAAGGT GACCCTGTTC AAGGGCTACG GCAAGTTCAC CGGCAAGGCT GCAGAAGGCT TCCAGGTGGA AGTGAATGGC GAGACGCTGA CCGCCAAGCA GGTCATCATC GCCACGGGCT CGAAGGCTCG CCATCTGCCA GGCGTCGCTG TCGACAACAA CCTGATCAGC GATAACGAAG GCGCGCTGAA GTTCGGTACC GTGCCGAAGA AGCTGGGCGT GATCGGCGCC GGCGTGATCG GCCTGGAGCT GGGCTCGGTG TGGCGCCGTC TGGGTGCCGA AGTGACCGTG CTGGAAGCGC TGCCCGCATT CCTGGGCGCC GCCGACGAAG GCGTGGCCAA GGAAGCGCAG AAGCTGCTGA CCAAGCAGGG GCTGCAGTTC CACCTGAGCG TCAAGGTCGA CGAAGTGAAG ACCGGCAAGG ACAACGTCAC GGTCAACTAC ACCGACAAGG ACGGCAAGGC GCAGACGCTG GAAGTCGATC GCCTGATCGT GTCGGTGGGC CGCGTGCCGA ACACCGACAA CCTCGGCCTG GACGCCGTGG GCCTGGGCGT GGACCAGCGT GGCTTCATCG AGGTGGACGA CCACTGCCAG ACCAAGGTGC CGGGCATCTG GGCAATCGGC GACGTGGTGC GTGGCCCGAT GCTGGCCCAC AAGGCAGAAG ACGAAGGCGT GGCCGTGGCC GAACGTATCG TTGGCCAGAA GCCGCATATC GACTTCAACA CGGTTCCCTG GGTTATCTAC ACGTTCCCGG AAATCGCGTG GGTCGGCAAG ACCGAGCAGC AACTCAAGGC CGAAGGCCGC GAGTACAAGT CGGGCCAATT CCCGTTCATG GCCAATGGCC GTGCGCTGGG CATGGGTGCT TCGGACGGTT TCGTGAAGAT GCTGGCCGAT GCCAGGACCG ACGAGATCCT GGGCGTGCAC ATCGTGGCCG CGAATGCATC GGACCTGATC GCCGAAGCCG TGGTGGCGAT GGAGTTCAAG GCTGCGAGCG AAGATATCGG TCGCGTCTGC CACCCGCACC CGTCGATGTC GGAAGTCATG CGCGAAGCCG CGCTGGCCGT CGACAAGCGT CAGCTCAACA TGTAA
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Protein sequence | MSKQFDVLVI GAGPGGYIAA IRAAQLGLNV ACLEGNAYDD PKGEARLGGT CLNVGCIPSK ALLASSEEFE NASHHLADHG ITVGDVKVDV AKMLKRKDDI VSKMTKGIEF LFRKNKVTLF KGYGKFTGKA AEGFQVEVNG ETLTAKQVII ATGSKARHLP GVAVDNNLIS DNEGALKFGT VPKKLGVIGA GVIGLELGSV WRRLGAEVTV LEALPAFLGA ADEGVAKEAQ KLLTKQGLQF HLSVKVDEVK TGKDNVTVNY TDKDGKAQTL EVDRLIVSVG RVPNTDNLGL DAVGLGVDQR GFIEVDDHCQ TKVPGIWAIG DVVRGPMLAH KAEDEGVAVA ERIVGQKPHI DFNTVPWVIY TFPEIAWVGK TEQQLKAEGR EYKSGQFPFM ANGRALGMGA SDGFVKMLAD ARTDEILGVH IVAANASDLI AEAVVAMEFK AASEDIGRVC HPHPSMSEVM REAALAVDKR QLNM
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