Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2029 |
Symbol | truB |
ID | 4038836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2195241 |
End bp | 2196185 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637977414 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_584177 |
Protein GI | 94310967 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0245667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0911973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATT CCTCCGCGAC CCGACCGCCC CGGCTGCCAC GCCGCGACGT GCACGGTGTG CTGCTGCTCG ACAAGCCTCT GGGTCTGTCG TCCAACGACG CGCTGGTACG CGCCAAGCGA CTGCTGCGCG CGAACAAGGC CGGCCACACG GGCACGCTGG ATCCGCTGGC GACTGGACTG CTGCCGCTGT GTTTTGGCGA GGCCACCAAG TTCTCTCAGG ATCTGCTTGA CGCGGACAAG ACCTACGAGG CGAAAGTCCG GCTTGGCGCG ACGACGACCA CAGGCGATGC CGAGGGCGAG ATCGTCGTCG AGCGACTGGT GACATGCGAT CACGACGCGC TTGATGCTGC GGTTGCGCGC TTTACCGGAG AGATCGAACA GGTACCGCCG ATGTACTCGG CACTCAAGAA GGACGGCAAG CCGCTTTACG AGTATGCCCG GGCCGGGCAG ACCGTCGAGC GCGCGGCGCG GCAGGTAACG ATTCACGCCA TCACGCTGCT GGACGTTGAT TTGCCTGCGG CGATGTTCAC GATGCGTGTC ACATGCAGCA AGGGCACGTA CATTCGCACG CTGGCCGAAG ATGTCGGCGA GGCGCTGGGT TGCGGCGCGC ACCTGATTGG GCTGCGCCGA ACCGCCGTCG GTGACCTGAC GCTGGAAGGC GCGGTCACGC TCGAGCAGAT TGACGCACAG GCTGACGAAG CACGGCCGGG AATGCTCGCG CCTGTTGACG CGCTGCTGCA ACGGTGCCCG CCGGTGCATC TCGATGCCGC CGCGATGGGG CGCTTTCTGC AAGGCCAGCG CATCGCACGC CGCGATCTGC CGGAAGGGCA GGTGCCGCCG GATGAGGGCA CGCTGGCACG TGTCTATGGC GACGAAGGGC GTCTGCTAGG CGTCGCGCGG ATGAAGGAAG GGGCCTTGCG GCCCGAGCGG CTAGTCAAAC TCTAG
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Protein sequence | MTDSSATRPP RLPRRDVHGV LLLDKPLGLS SNDALVRAKR LLRANKAGHT GTLDPLATGL LPLCFGEATK FSQDLLDADK TYEAKVRLGA TTTTGDAEGE IVVERLVTCD HDALDAAVAR FTGEIEQVPP MYSALKKDGK PLYEYARAGQ TVERAARQVT IHAITLLDVD LPAAMFTMRV TCSKGTYIRT LAEDVGEALG CGAHLIGLRR TAVGDLTLEG AVTLEQIDAQ ADEARPGMLA PVDALLQRCP PVHLDAAAMG RFLQGQRIAR RDLPEGQVPP DEGTLARVYG DEGRLLGVAR MKEGALRPER LVKL
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