| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1985 |
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| Symbol | |
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| ID | 4038790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2158538 |
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| End bp | 2160223 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637977368 |
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| Product | YidE/YbjL duplication |
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| Protein accession | YP_584133 |
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| Protein GI | 94310923 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2985] Predicted permease |
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| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0595755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGT TTGTCTCCAC CCTCAAGGCG TACCCCGAGA TCGCGATTTT TCTCGCACTG
GGAATCGGCT ACTGGGTAGG CGGGAAGAGC TACAAGGGGT TCAGCCTGGG CGCCGTAACG
TCGACACTGC TGGTGGCGAT CGTCATCGGC ATCCTCGGCG TGAAGATCTC CGCGAACGTG
AAATCCGTCT TTTTCCTGAT GTTTCTGTTT GCGGTGGGCT ATGGCGTCGG CCCGCAGTTC
GTTCGCGGCA TTGCGAAGGA TGGCATCCCT CAAGCCATAT TTGCTGCGAT AGTCTCGGTG
CTGTGTCTCG CCGCACCCAT CGTTGCGGCG ATGGTCGCCG GCTACGATCT CGGGTCGGCT
GCCGGATTAT TTGCGGGTTC GCAGACAATC TCGGCGTCCA TGGGCCTCGC CACTGATGCC
ATCAATCGCC TGGGCCGATC TCCGGAAGAA ACCAAACAGC TTCTGGACGG CATGCCGATC
GCCTATGCGG TCACGTATAT CTTCGGTACG GTCGGCTCGG CAATTATCCT GGCGCAAATT
GGCCCCAAAC TGCTTGGCAT CGACCTTGTA GCTGCCTGCA AGGATTATGA GCAGCAACTT
GGAGCCGGAG CAGACGGAGA AGGCACCGAA TGGCATGAGT TTGAACTGCG AGCCTACGCG
CTGGCCCCCC ACAGCCCATA CATCGGCAAG TCCGTAGCCG AACTGGAGGC CAGCACGGCC
GAAGGCGTAC GTGCCTTTAT CGAACGCATT CGCCGAGGTG GCAAGATTAT CGAGGCACAA
CTCGATACCG TTCTGGAGCC TGGCGATATC GTCGCAATAG GCGGAAAGCG CGATCAACTG
ATTGCCAGAC TGGGACCAAG CGGCCGTGAA GTGGAAGACT CAGAGCTGCT CAATGTGCAG
ACGGAGGGTG TGGACATCTA TATCACCAAC AAGGAGGTTG ATGGCCACAC ACTGCAGGAG
ATGGCTCGGT GGCCCGGTGC GCGTGGGATT TTCCTGAAGA AGATCAAGCG CGGACCGACG
GAAACGGTCA TCCCCGTACT GCCGAAAACC AAGCTCTACC GCGGTGACGT CATCACGGTG
GTCGGCCGCA CGCAGGACAT CAATGCGACA GCGAAACATG TCGGGTATAT CGACCGCCCG
ACAACGGTGA CCGACGTGGC ATTCGTGTCG CTGGCGATTA CCGTCGGCGC ATTGATCGGT
GCCGTCGTGA TCAACGTCAG CGGCATTCCC CTGACGATTT CCACGGCAGG CGGCGCGCTA
ATCGCAGGTA TTATCTTCGG TTGGTACCGG GCCATTCACC CGACTTTCGG ACGCATACCT
GAGCCAACTC TTTGGTTCAT GAATTCGGTT GGCCTCAATG TGTTCATTGC GGTCGTCGGT
ATTTCCGCGG GCCCTGGCTT TATTGCCGGC CTGCAGAAAC TCGGCGTCAG CCTCTTCCTC
TGGGGTATTT TCGCCACATC GATACCGCTA ATCATCGGCA TGTACCTGGC CAAGTACGTA
TTTCGCTTTC ATCCGGCGCT CGTACTTGGA GTCTGTGCCG GCGCGCGCAC AACCACTGCT
GCGCTCGGCA TGATCTGCGA GACCGCGAAA AGCCAAGTGC CAGGCCTTGG CTATACCGTG
ACCTACGCTG TGGGTAACAC CCTGCTGACA ATCTGGGGGA TGGTCGTCAT CATGATTCTT
TCATGA
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| Protein sequence | MTWFVSTLKA YPEIAIFLAL GIGYWVGGKS YKGFSLGAVT STLLVAIVIG ILGVKISANV
KSVFFLMFLF AVGYGVGPQF VRGIAKDGIP QAIFAAIVSV LCLAAPIVAA MVAGYDLGSA
AGLFAGSQTI SASMGLATDA INRLGRSPEE TKQLLDGMPI AYAVTYIFGT VGSAIILAQI
GPKLLGIDLV AACKDYEQQL GAGADGEGTE WHEFELRAYA LAPHSPYIGK SVAELEASTA
EGVRAFIERI RRGGKIIEAQ LDTVLEPGDI VAIGGKRDQL IARLGPSGRE VEDSELLNVQ
TEGVDIYITN KEVDGHTLQE MARWPGARGI FLKKIKRGPT ETVIPVLPKT KLYRGDVITV
VGRTQDINAT AKHVGYIDRP TTVTDVAFVS LAITVGALIG AVVINVSGIP LTISTAGGAL
IAGIIFGWYR AIHPTFGRIP EPTLWFMNSV GLNVFIAVVG ISAGPGFIAG LQKLGVSLFL
WGIFATSIPL IIGMYLAKYV FRFHPALVLG VCAGARTTTA ALGMICETAK SQVPGLGYTV
TYAVGNTLLT IWGMVVIMIL S
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