| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1980 |
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| Symbol | |
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| ID | 4038785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2154051 |
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| End bp | 2155052 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637977363 |
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| Product | asparaginase |
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| Protein accession | YP_584128 |
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| Protein GI | 94310918 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0624321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTAC TCCTGCCTCG TATCGTTGTG CTCGCGACTG GTGGCACCAT CGCCGGTTCG
TCCGCAAATC CTGCCAGTAG CGCGCACTAT CAGGCTGCGA CAGTGCCCGT ATCGCAACTT
GTACAGGCAG TGCCCGCGCT GGCCGATGTG GCGCGAGTCG AGGCGGAGCA GGTGGCGCAG
GTGGACAGCA AGGACATGAT GTTCGATCTC TGGCGGATGC TTGCCGCGCG AATCGGGTAT
TGGTCCGCGC AGGACGATGT CGCCGGGATC GTGATCACAC ATGGCACTGA CACGCTGGAA
GAGACGGCGA TGTTCCTGCA TCTGACACAG GCTTGCCCGT TGCCTGTCGT GATGACGGCG
GCCATGCGCC CATCGACGTC GCTTTCCGCT GACGGGCCGC TGAACCTGCT CGATGCGGTG
CGCGTGGCGG CAAGCCCGGT GGCAGTTGGC AAAGGTGCGC TCGTGGTGCT GAATCAGCAG
ATTCATGCCG CGCGTGATGT CGTCAAGGCG CATACGTCGG CTGTCGATGC TTTCCATTCG
CCAGTTGCCG GTCCGCTGGG TTTTGTGCAG GACACCTATG TCCATTTCTC GCGCACCCCG
GGTCCTGATC AGGCGCCGCG CTTGCCGGTG CCCGCTGCAT GGCCGTTGGT GGAGATCGTC
GCCAGCTACG CGCAGCCGGG GAGGGTGGGT ATCGATGCGA TGGTGGCCGC CGGCGTGCTC
GGGTTTGTCG TGGCCGCGGC CGGCAACGGT TCCGTGCACG AAACGCTGAC GGCCGCGCTG
GTCGATGCTG CGGCATGTGG CGTTGCGGTG GCTCGAAGCT CGCGTACCGG TGCTGGTCAT
GTGGCAATCC CCGCACCGCC GCGACCGGCA GGTGGCGTAT TTGTCTCGGC GGGCGACCTC
AATCCCTACA AAGCGCGCGT GCTGCTGCTG CTGGCGTTGG CCGGCGACCC TTCGCTGGGG
CGCGATGCGG CCCGGCTTCA GGCGCTCTTC GAGCGGTACT GA
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| Protein sequence | MSVLLPRIVV LATGGTIAGS SANPASSAHY QAATVPVSQL VQAVPALADV ARVEAEQVAQ
VDSKDMMFDL WRMLAARIGY WSAQDDVAGI VITHGTDTLE ETAMFLHLTQ ACPLPVVMTA
AMRPSTSLSA DGPLNLLDAV RVAASPVAVG KGALVVLNQQ IHAARDVVKA HTSAVDAFHS
PVAGPLGFVQ DTYVHFSRTP GPDQAPRLPV PAAWPLVEIV ASYAQPGRVG IDAMVAAGVL
GFVVAAAGNG SVHETLTAAL VDAAACGVAV ARSSRTGAGH VAIPAPPRPA GGVFVSAGDL
NPYKARVLLL LALAGDPSLG RDAARLQALF ERY
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