Gene Rmet_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1906 
Symbol 
ID4038710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2075741 
End bp2076718 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID637977288 
Producthypothetical protein 
Protein accessionYP_584054 
Protein GI94310844 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.375062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGAC GTTTCAAGGC GCTTGGCGCC ATGCTTTCCC TTGTAATGGC ATCGACCATG 
GCGACGGCTG CGCCGCCGCA CTATCCCAGC AAGCCGATTC GGCTGGTCGT GCCGTTCTCG
GCCGGCAGCG CCACCGACAT ACTGGCGCGC ATCATCAGCA CCAAGATGGG CGAAGGCGGC
ACGTATCAGA TCGTTGTCGA CAACCGGCCT GGCGCGGGCG GCACGCTTGG CGCCACCACG
GTGGCCCGGT CGGCGCCGGA TGGGTACACC CTTATTCTGG TCTCGGTGGG CCACGCCATC
AATGCGACGC TCTACCCGAA GCTCGGCTAT GACACGGTCA AGGATTTCGC GCCGGTCTCG
CTGGTGGCAT CGGTGCCGAA CGTGTTGGTA GTGAACGCGG CGAGTCCGTA CAAGTCGGTG
CGTGATCTGG TGACGGCGGC GAAGGCCAAG CCGGGCGCGA TGAACTTCGA CTCGGCGGGA
TCGGGCAGTT CCACGCACCT GAGCGGCGAG TTGTTCAAGA TGCAGGCCGG GATCGACATC
GTGCATATTC CGTACAAGGG CACTGGCGAG GCTCTGACCG ATGTCATGGC CGGGCGCGGT
GACATGATGT TCGCGCCGAC GCTTTCCGCC ATGCCGTTTG TCAAGCAAGG CAAGCTGCGC
GCGCTGGCAG TGACCACGCC CGCGCGCACG AGCGTGCTGC CCGATATCCC GACGGTAGCG
GAGGCCGGAC TGCCAAGCTA CGCCTTCGAT TCCTGGTTCG GCGTGCTGGC GCCGGCGGGT
ACCCCGAAGG AAATCGTCGA TGCGCTAAAC GCGGAGATCG GCAAGGTGCT GGCTTCGCCA
GACGTGCGCG AGAGGATGGC TGCACAGGGT GCCGAGCCCC GCCGCAGCAC ACCGCAGGCG
TTCGCCAGCT ATATCCAGGT GGAGATCGGC AAGCTCGCGC CAGTGGTGCG GCAGTCGGGG
GTGACGGCGG GGCAGTAG
 
Protein sequence
MLRRFKALGA MLSLVMASTM ATAAPPHYPS KPIRLVVPFS AGSATDILAR IISTKMGEGG 
TYQIVVDNRP GAGGTLGATT VARSAPDGYT LILVSVGHAI NATLYPKLGY DTVKDFAPVS
LVASVPNVLV VNAASPYKSV RDLVTAAKAK PGAMNFDSAG SGSSTHLSGE LFKMQAGIDI
VHIPYKGTGE ALTDVMAGRG DMMFAPTLSA MPFVKQGKLR ALAVTTPART SVLPDIPTVA
EAGLPSYAFD SWFGVLAPAG TPKEIVDALN AEIGKVLASP DVRERMAAQG AEPRRSTPQA
FASYIQVEIG KLAPVVRQSG VTAGQ