Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1882 |
Symbol | |
ID | 4038684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 2044208 |
End bp | 2046151 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637977262 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_584030 |
Protein GI | 94310820 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.121915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGATT TCGTACGCAA CAACCGGCGC CTGATGCTCC TTCTGCTGCT GGTGCTTGTC TTCCCGTCGT TCGTATTCTT CGGCGTGGAG AGCTATTCGC GCTTCATGGA CAGCTCGCAC GATGCTGCCA AGGTCGACGG CCGGGCCATC ACCGTGCAGG AAGTCGACAA TGTGGTGCGC GACCAGAGCG AACGGATGCG CCAGATGCTG GGCAACAACT ACGATCCGCG CATGTTCGAA GGCCCTGCCG CGCGGCAGGC CGTGCTGGAC CAGTTGATCC AGCAGCGTGT TATTTCGGAA GCCACTCAGA AGAAGCACCT GACGGTTTCC GATGCGCAGA TCGCTGCTGC GATCCAGAGC ATTCCCGCCA TCGCCCAGCT TCGCACGGCG GACGGCAAGT TCGACGAGAA GGCCTACGTG CAGCTGCTGG CGGCGCAAGG TATGACGCCC GAGCAGCTCG ACGCACGGAT GCGTTTCGAA CTCTCCACGC AGCAACTGGG TGGTGCCATC GGTACGACAG CTTTCGTGCC GAAGTCGCTG CTCGATCGCC TGATCGCGAT TCGCGACCAG CAGCGTGATG TGCAGGCCAT CGTGATCAAG CCGGCCGATT TCACGGCCAA GGTGACGCCG GACGCCGCCG CGCTGAAGGC CTACTACGAG TCCCATCTGG CAGCGTACAC GATGCCCGAG CAGGCCAAGG TCGAGTATCT GGTGCTGTCG GGTGATGCCC TGGCTGCCAG CCAGACGATC ACCCCCGATC AGTTGAAGTC GTATTACGAC AGCAACATAC AACGTTTCCA TACTGACGAG CAACGTCGCG CCAGCCACAT CCTGATCGCC GCGCCGAAGG ATGGCAAGGA GGCAGACCGC AAGGCCGCCA AGGAGAAGGC CGAGAAGCTG CTGGAGGACC TGCGCAAGCA TCCAGACACG TTCGCCGATG TTGCGAAGAA GAACTCGCAG GATCCTGGTT CGGCGGAGAA GGGCGGCGAC CTCGGCTTCA TGGGTCGTGG TGCCCTGGTC AAGCCGTTTG AAGACGCGAT GTTTGCGCTC AAGGATGGCC AGATCAGCGA TGTTGTGGAA ACCGATTACG GCTATCACAT CATCAAGCTG ACGGGTATCA AGCCGGCAGC GACCGAGCCG CTCGAGGCAG TGCGTCCCGA ACTCGAGATC GAACTCAAGA AGCAGCTTGC CGCGAAGGCG TATACCGAGC AGGCCGATGC GTTCGGCAAC ATGGTGTACG AGCAGTCCGA GAGCCTCAAG CCCGCCGCCG ACAAGTTCAA GCTGACGATC CAGACTGCGG ACAATGTCAC GCGTACGCCG AATCCGGTGT TGGGCAAGGA CAACCCGCTC AATAACGAGA AGGTGCTCAA GGCGCTGTTC AGCGATGACG CCATCAAGAA CAAGCGCAAT ACGGAAGCCG TGCAAGTCGG CCCGACTACG CTGGTGTCGG CGCGCATCGT CGACTATCGC CCGGCCGCCG CGCGCAAGTT CGAAGAGGTA GAGGCGCTGG TGCGTCAGGC CTACGTCGCA CAGCAGGCGG CGGAACTGGC ACGCAAGGAT GGCGAAGCCC GTCTTGATGC CTTGAAGAAG AGCGGCAGCG CTGATGGCTT CGGCTCGATG GTGACCGTGT CGCGTGCCAA GGCTGATGGC GTGTCGCCGA AGGCTGTCGA TTCGATCATG CGTGCCGATG CCTCGAAGCT GCCTTCGCTC GTGGGTGTGG ACCTCGGCGC GGATGGGTAC GCGATCTACC GTATCGCCAA GGTTGGCACG CCGCCGCAGG CCAACGCAAA CCAGCGTGAG GCTGACGCGC AGCAACTGGG CCAGATGGCC GGCCAGACGG AACTGGCAGC GTTCTATGAC GTGCTCAAGG CCGGTGCGAA GGTGAAGATC CTGCATCCGG CCAAGACGGA CGACGCGGCA GCGAGCGCAC CTGCTGCACA CTGA
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Protein sequence | MLDFVRNNRR LMLLLLLVLV FPSFVFFGVE SYSRFMDSSH DAAKVDGRAI TVQEVDNVVR DQSERMRQML GNNYDPRMFE GPAARQAVLD QLIQQRVISE ATQKKHLTVS DAQIAAAIQS IPAIAQLRTA DGKFDEKAYV QLLAAQGMTP EQLDARMRFE LSTQQLGGAI GTTAFVPKSL LDRLIAIRDQ QRDVQAIVIK PADFTAKVTP DAAALKAYYE SHLAAYTMPE QAKVEYLVLS GDALAASQTI TPDQLKSYYD SNIQRFHTDE QRRASHILIA APKDGKEADR KAAKEKAEKL LEDLRKHPDT FADVAKKNSQ DPGSAEKGGD LGFMGRGALV KPFEDAMFAL KDGQISDVVE TDYGYHIIKL TGIKPAATEP LEAVRPELEI ELKKQLAAKA YTEQADAFGN MVYEQSESLK PAADKFKLTI QTADNVTRTP NPVLGKDNPL NNEKVLKALF SDDAIKNKRN TEAVQVGPTT LVSARIVDYR PAAARKFEEV EALVRQAYVA QQAAELARKD GEARLDALKK SGSADGFGSM VTVSRAKADG VSPKAVDSIM RADASKLPSL VGVDLGADGY AIYRIAKVGT PPQANANQRE ADAQQLGQMA GQTELAAFYD VLKAGAKVKI LHPAKTDDAA ASAPAAH
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