| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1819 |
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| Symbol | |
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| ID | 4038621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1973011 |
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| End bp | 1975239 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977199 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_583967 |
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| Protein GI | 94310757 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.258829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00296293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCATCCC GCCAGTTCCC GGCCGCCCGC CCCGTCCACC GGCAGCCTGT CCCGTCGCGC
CTGCGCGCCA CAGTCTTCAT CGCCCGCGTG GCGGTCATCG CGGGCCTGCC GCTTGGCGCG
TTCGCCCAGA CCGCCCAGAC CGCCCAGACC GCCCAGACCG CCCAGACCAC GCAAACCGCA
CAAACGGCAC AATCCGCCCC GGAACAGGCG CTGCCGACTG TAACGGTGAG CGCCGCGCAG
GAAATCGACG TCGGACCGCA CCTGGACAAG CCCATGACCA GTGGCGCGCT CGGTTCCCGG
AAACAGCTCG ACACACCGTT CTCGACCACG GTCATCACCG GCGACGACCT GGCCGAACGC
CAGGTCACCA AGCTCGGCGA CGTGTTCTTC ACCGATGCAT CGGTCTCCGA CAACAGCAAC
GCGAACAATG CATGGGCGTC CTACCTGACC GTGCGCGGGC TGCAGCTCGA CTGGCAGAAC
GGATTCAAGA TCAACGGCAT GCCGTTCGTG AGCTACGGCA TCACGCTGCC CTACGAACAG
CTCGAACAGG TGGAACTGCT CAAGGGCGCA TCGGGCTTCA TGTACGGCTT CGGTAACCCG
GGCGGCACGG TCAACTACAT TACGAAGAAG CCGACCGACG TCTTCACGGC CAGCGCGGAA
CTGGGCTATC GCTCGTCCCA CCTGTGGAGC GAGCATGTCG ACGTCGGTGG CCGGGCCGGC
CCGGACAACA TGTTCGGCTA CCGACTGAAC CTGACGCACG AGGAAGGCAA GCCGTCGAAC
GCCGTCGGGC TGAACCGCAA CTCCATATCG CTTGGCCTGG ACGCCCGCAT CACGCGAGAC
CTGACCTGGA CCTTCGACGG CATCTACCAG GACCGCAGCA CCTTCGGCCA GACGCCCACC
TTCACCACAT ACAGCCTTGC CCCCGGAAGC CAGTTGCCAG GCGTGGTCAG CGGCCGGGGT
GGCCTGTTCG CAGGCCCGGA CCAGCACTTC TACTCCAACC TGCAGTTCTA CTCCACGGGC
CTGCGTTACA ACCTCAACAC CGACTGGACG GTCAGCACGA TCTACAGCTT CAGCAAGCAG
TCGCGCAGCC GCAACGAGTC GAGCCTGAGC CTGATCGACA GCAACGGCGA CTACACCGAC
CTGCGCTACG ACGGCGCAGA GGGACACCAG TTCAACCAGT GGACGACCAT GGTCGAAGGC
CGCTTTCGTA CCGGCCCGTT CTCGCACCAG TTCGTCGGCG GCGTGACGTG GCAGAACCAG
GTCAACCGCT ACAGCAGCAA CCCGGTGTCG CTGAGTCTGG ACCCAGGCAA CCTGTCGCAG
CCGTACACCG GCGTTTACTA CAGCCAGGTT GCGTTCAACA AGTACCGTGC CAGCGACATC
ACGCAAAAGG CGCTGTTCAT GAGCGACACG ATCCAGCTGA CCGAGCGCTG GTCGGTGCTG
GGCGGGCTGC GCTTCACCAA CTACGAGCAG AACAGCTACG GGACCGACGG CACGCGCACC
ACCCACTATG ACAAGACCGG CCTGCTGACG CCGACCGTCG CGCTGATGTT CAAGCCGATG
CCGAGCACCA CGCTGTACGC CAGCTACGTG GAAGCGTTCG ACGGCGGCAC CACGGTCGGC
ACGACGTTCG CGAACGCGGG CGCGCAACTG AATCCGGTCA AGAGCAAGCA ATACGAAATC
GGCGCGAAGA CGGATCAGGG TCTCTGGACC GGCACGGCGG CGCTGTTCCG CATCGAGCGC
GGTGCCGAGT ACACCAACTC GCAGAACGTG TTGGTGCAGG ATGGCCTGTC GATCTACCAG
GGCGCAGAGC TGGCTGGAGC CGCGCGTATC GGCTCCCAAT GGGAAGTGGG CGGCAGCGCG
ATGTATCTGG ACAGCTACTA CGACAAGGGC CAGACCTACA ACGGCAACCG CGTGGCCGGC
GCGCCCAGCT TCATCCTGAC CGGCCGGCTG GCGTATCGCA TTCCGTACGT GCCGGGCCTG
AAGGTGGGCA TCGACGGCAA GTACACGGGC ACAACCAAGC TGCGCCCGGC CGGCGACCTC
ACGCTGGGTG GTTACACGAT ATTCAACCTT GGCGCGACGT ACAGCACACG CGTGGCAGGC
AAGGAACTGA CGCTGCGGGC AGCGTTGACC AACCTGACCA ACAAACGCTA CTGGGGCTTC
CAGTACGCGG AGTACATCCA GCCGGGCGAT CCGCGCGCGA TCAGCGTCAG CGCGAAGATC
TCGTACTGA
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| Protein sequence | MSSRQFPAAR PVHRQPVPSR LRATVFIARV AVIAGLPLGA FAQTAQTAQT AQTAQTTQTA
QTAQSAPEQA LPTVTVSAAQ EIDVGPHLDK PMTSGALGSR KQLDTPFSTT VITGDDLAER
QVTKLGDVFF TDASVSDNSN ANNAWASYLT VRGLQLDWQN GFKINGMPFV SYGITLPYEQ
LEQVELLKGA SGFMYGFGNP GGTVNYITKK PTDVFTASAE LGYRSSHLWS EHVDVGGRAG
PDNMFGYRLN LTHEEGKPSN AVGLNRNSIS LGLDARITRD LTWTFDGIYQ DRSTFGQTPT
FTTYSLAPGS QLPGVVSGRG GLFAGPDQHF YSNLQFYSTG LRYNLNTDWT VSTIYSFSKQ
SRSRNESSLS LIDSNGDYTD LRYDGAEGHQ FNQWTTMVEG RFRTGPFSHQ FVGGVTWQNQ
VNRYSSNPVS LSLDPGNLSQ PYTGVYYSQV AFNKYRASDI TQKALFMSDT IQLTERWSVL
GGLRFTNYEQ NSYGTDGTRT THYDKTGLLT PTVALMFKPM PSTTLYASYV EAFDGGTTVG
TTFANAGAQL NPVKSKQYEI GAKTDQGLWT GTAALFRIER GAEYTNSQNV LVQDGLSIYQ
GAELAGAARI GSQWEVGGSA MYLDSYYDKG QTYNGNRVAG APSFILTGRL AYRIPYVPGL
KVGIDGKYTG TTKLRPAGDL TLGGYTIFNL GATYSTRVAG KELTLRAALT NLTNKRYWGF
QYAEYIQPGD PRAISVSAKI SY
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