| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1808 |
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| Symbol | |
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| ID | 4038610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1959433 |
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| End bp | 1961127 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637977188 |
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| Product | 2,3-dimethylmalate lyase |
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| Protein accession | YP_583956 |
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| Protein GI | 94310746 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1213] Predicted sugar nucleotidyltransferases
[COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02320] phosphoenolpyruvate phosphomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0185861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0864763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC ACGACCCGAA CCTCCTCGCC ACCTCGCGCA GCGCCCGCCT GCGCCAGATG
CTGCGCTCGA ACGAACTCGA ATTCATCATG GAAGCCCATA ACGGCCTGTC CGCGCGCATC
GTGCGCGAGG CCGGCTTCAA GGGCATCTGG GCCTCGGGCC TGGCCATCTC CGCCCAGTTC
GGCGTGCGCG ACAACAACGA GGCAAGCTGG ACCCAGGTGG TCGACAACCT CGAATTCATG
GCCGATGCCA GCGATCTGCC GATCCTGCTG GACGGCGACA CCGGCTACGG CAACTTCAAC
AACGTGCGCC GCCTGGTGCG CAAGCTCGAG CAGCGCGGCA TCGCCGGCGT CTGCATCGAA
GACAAGATCT TCCCGAAGAC CAACAGCTTC ATCGGCGGCG AGCAGCAGCC GCTGGCCGAT
ATCGACGAGT TCTGCGGCAA GATCAAGGCC GGTAAGGATT CGCAGGCCGA CGACGACTTC
TCGATCGTCG CGCGTGTCGA AGCGCTGATC GCCGGCTGGG GCATGGAAGA AGCCCTGCGC
CGCGCCGAGG CGTACCGTCA GGCCGGCGCC GACGCCATCC TGATCCACAG CAAGCTGTCG
AAGGCCGACG AGATCGTGAC CTTCGCGCGC GAATGGGCCG GGCGCGCGCC GCTGGTGATC
GTTCCCACCA AGTACTACAG CACGCCGACC GACGTGTTCC GCAAGGCCGG CATCAGCCTC
GTGATCTGGG CCAACCACCT GATCCGCGTG GCCGCATCGT CGATGCAGGC TGTGGCCCGG
GAAATCCACG ACAGCCAGAC GCTGGTCAAC GTGGAAGACC GCATCGCCAC CGTCAACGAA
ATTTTCCGCC TGCAGGATGC CGACGAATAC TCGGCCGCCG AGAAGATCTA CCTGACCGGT
GGCCAGGCGC CCAGCTCCGC CGTGGTGCTT GCGGCCGGAC GCGGCAAGGG CCTGGAGGCC
CTGACCGAAG ACAAGCCCAA GATCATGCTG CCGGTAGCCG GCAAGCCGCT GCTGCGCTGG
CTGGTCGACG GCTTCAAGAA CCAGGGCATC AACGACATCA CCGTGGTGGG CGGCTACAAG
GCCGAGGCGA TCGACGCGGC CGGCATCAAG CTGGTGCGCA ACGAGCGCCA CGCCGCCACC
GGCGAGCTGG CTTCGCTGGC GTGCGCCGCC GATTCGCTCG AGACCGACAC CGTCGTCTCC
TATGGCGACC TGATGTTCCG CAGCTACATC CTGCGCGACC TGCTGGAAAC CGATGCGCCG
TTCAGCGTGG TGGTCGACTC ATCCGAGTCC GCCCCGTCGA ACCAGAGCGT GCGCGATTTC
GCGTGGTGCT CGGCCGCCGA CGACCGCGAC CTGTTCGGCC AGAAGGTGCT GCTGCGCAAG
ATCTCCGACA CGCCGGCCGC TACCGACGGA GAGCCGCATG GCCGCTGGAT CGGTCTGCTC
AACGTGCGGG GCGAAGGCCG CGCGCGCCTG CAGAAGCTGC TGGCCGAACT GCGTCAGCGG
CCCGACTTCG ACTCGCTCGA CATGCCCGAC CTGATCAACG CGCTGGTCGA AGCCGGCGAG
AAGGTCGAGG TCCGTTACGT ACATGGCCAC TGGCGCGGCG TGAACGACCT GGAGGACTTC
CGCCGGGCCG GAGACTTCGC GCACACGCAA ACGCCGTACG CGCTGGGCAA CAACGACGGA
GAGACTGCCC GATGA
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| Protein sequence | MNAHDPNLLA TSRSARLRQM LRSNELEFIM EAHNGLSARI VREAGFKGIW ASGLAISAQF
GVRDNNEASW TQVVDNLEFM ADASDLPILL DGDTGYGNFN NVRRLVRKLE QRGIAGVCIE
DKIFPKTNSF IGGEQQPLAD IDEFCGKIKA GKDSQADDDF SIVARVEALI AGWGMEEALR
RAEAYRQAGA DAILIHSKLS KADEIVTFAR EWAGRAPLVI VPTKYYSTPT DVFRKAGISL
VIWANHLIRV AASSMQAVAR EIHDSQTLVN VEDRIATVNE IFRLQDADEY SAAEKIYLTG
GQAPSSAVVL AAGRGKGLEA LTEDKPKIML PVAGKPLLRW LVDGFKNQGI NDITVVGGYK
AEAIDAAGIK LVRNERHAAT GELASLACAA DSLETDTVVS YGDLMFRSYI LRDLLETDAP
FSVVVDSSES APSNQSVRDF AWCSAADDRD LFGQKVLLRK ISDTPAATDG EPHGRWIGLL
NVRGEGRARL QKLLAELRQR PDFDSLDMPD LINALVEAGE KVEVRYVHGH WRGVNDLEDF
RRAGDFAHTQ TPYALGNNDG ETAR
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