Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1779 |
Symbol | |
ID | 4038581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1931328 |
End bp | 1932491 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637977159 |
Product | hypothetical protein |
Protein accession | YP_583927 |
Protein GI | 94310717 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00148709 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA TTTACCAACG GCCGGAACTC GCCAAACAGA TGGCCAGGCA ACTCCTGCAA CCCGGGGTAC TGGACGAGGG CCTGCGCTCG GGCCTGTTCC TTTCCGGCCT GCGCCGCACG GGCAAGACCA CGTTTTTGAT CAACGACCTG ATTCCCGCGC TCGAAGACCT TGGCGCGATC GTGATCTATG TGGACCTGTG GAGCGACACG CAGCGCAGCC CCGCCCGGCT GATCCTGGAA GCCGTCAGGA AAACACTGAC CGAGCTGGAG TCCCCGTCTT CCACGATCCT TCGCAAGCTC AAGCGTCTGG CCAGCGCCGA CATCGCCGCC TTCGGCTTCA AATTCAGCTT CAAGCTCGAC ACCCTCGGCG AGGCTGGCGG CGCGACGCTG GCCCAGGCAC TGAAAGAAGT CGTCGATCAG GCCGGCGCCG ATGTCGTGCT GATCGTCGAC GAAGTGCAGC ACGCCATCAC CTCGGACGAA GGCAATCAAA TGCTGCTGGC GCTCAAGGCC GCGCGTGATG CCATCAATCC CCGCCCCGGC ACCACAGGGC ATTTCCTGTT CGTGGGAACC GGCTCGCATC GCGCGCTGGT GGGCGAACTG ACCGCGCGAC GCAACCAGGC CTTCGCCGGC GCCACGTCGG TCGCTTACCC GGTGCTCGAC CGGGAATATA TCGACTATCT GCTGGCGCGC CTGTCCTCCG AGGGCTTTAC CGCCCTGCCC TCGCCCGACG TCGCCATCAA GGCGTTCCAG GCGCTTGGCC ATCGGCCCGA GGAGATGATC CGGGCGCTGC GGCAATTGCA TTTCCACCTG CCCGAGGGCA GCAATCCCGA CGAGCACCTG CCGACCATCG CCAACACGCT GCGTTCGGCG GCTGCCGACG TGGAACTGAT GAAGCTCGAA CAACTTGGCG GCCTGGCAAC CGCGATCTTC GACCGCATTG CCACCACGCA AGGCGACGCA CGGGGTTTGT TCTCGGCCGA CGCGGCCGCG GCGTACTCCT TGGCAATAGG CCGGGAAGTG AAGGTCGAGG AAGCACAGCC GGTGGTCAAC GAACTGATGG CAAGCAACCT GATCATGCGC AAAGGGCACG GCCTGTACGG CATCACCGAC CCGTTCGTGC AGGAGATGTG GCGCGAACGG AAGTCGCTTG AAGGAAAACT CTGA
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Protein sequence | MSNIYQRPEL AKQMARQLLQ PGVLDEGLRS GLFLSGLRRT GKTTFLINDL IPALEDLGAI VIYVDLWSDT QRSPARLILE AVRKTLTELE SPSSTILRKL KRLASADIAA FGFKFSFKLD TLGEAGGATL AQALKEVVDQ AGADVVLIVD EVQHAITSDE GNQMLLALKA ARDAINPRPG TTGHFLFVGT GSHRALVGEL TARRNQAFAG ATSVAYPVLD REYIDYLLAR LSSEGFTALP SPDVAIKAFQ ALGHRPEEMI RALRQLHFHL PEGSNPDEHL PTIANTLRSA AADVELMKLE QLGGLATAIF DRIATTQGDA RGLFSADAAA AYSLAIGREV KVEEAQPVVN ELMASNLIMR KGHGLYGITD PFVQEMWRER KSLEGKL
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