Gene Rmet_1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1779 
Symbol 
ID4038581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1931328 
End bp1932491 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content64% 
IMG OID637977159 
Producthypothetical protein 
Protein accessionYP_583927 
Protein GI94310717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00148709 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA TTTACCAACG GCCGGAACTC GCCAAACAGA TGGCCAGGCA ACTCCTGCAA 
CCCGGGGTAC TGGACGAGGG CCTGCGCTCG GGCCTGTTCC TTTCCGGCCT GCGCCGCACG
GGCAAGACCA CGTTTTTGAT CAACGACCTG ATTCCCGCGC TCGAAGACCT TGGCGCGATC
GTGATCTATG TGGACCTGTG GAGCGACACG CAGCGCAGCC CCGCCCGGCT GATCCTGGAA
GCCGTCAGGA AAACACTGAC CGAGCTGGAG TCCCCGTCTT CCACGATCCT TCGCAAGCTC
AAGCGTCTGG CCAGCGCCGA CATCGCCGCC TTCGGCTTCA AATTCAGCTT CAAGCTCGAC
ACCCTCGGCG AGGCTGGCGG CGCGACGCTG GCCCAGGCAC TGAAAGAAGT CGTCGATCAG
GCCGGCGCCG ATGTCGTGCT GATCGTCGAC GAAGTGCAGC ACGCCATCAC CTCGGACGAA
GGCAATCAAA TGCTGCTGGC GCTCAAGGCC GCGCGTGATG CCATCAATCC CCGCCCCGGC
ACCACAGGGC ATTTCCTGTT CGTGGGAACC GGCTCGCATC GCGCGCTGGT GGGCGAACTG
ACCGCGCGAC GCAACCAGGC CTTCGCCGGC GCCACGTCGG TCGCTTACCC GGTGCTCGAC
CGGGAATATA TCGACTATCT GCTGGCGCGC CTGTCCTCCG AGGGCTTTAC CGCCCTGCCC
TCGCCCGACG TCGCCATCAA GGCGTTCCAG GCGCTTGGCC ATCGGCCCGA GGAGATGATC
CGGGCGCTGC GGCAATTGCA TTTCCACCTG CCCGAGGGCA GCAATCCCGA CGAGCACCTG
CCGACCATCG CCAACACGCT GCGTTCGGCG GCTGCCGACG TGGAACTGAT GAAGCTCGAA
CAACTTGGCG GCCTGGCAAC CGCGATCTTC GACCGCATTG CCACCACGCA AGGCGACGCA
CGGGGTTTGT TCTCGGCCGA CGCGGCCGCG GCGTACTCCT TGGCAATAGG CCGGGAAGTG
AAGGTCGAGG AAGCACAGCC GGTGGTCAAC GAACTGATGG CAAGCAACCT GATCATGCGC
AAAGGGCACG GCCTGTACGG CATCACCGAC CCGTTCGTGC AGGAGATGTG GCGCGAACGG
AAGTCGCTTG AAGGAAAACT CTGA
 
Protein sequence
MSNIYQRPEL AKQMARQLLQ PGVLDEGLRS GLFLSGLRRT GKTTFLINDL IPALEDLGAI 
VIYVDLWSDT QRSPARLILE AVRKTLTELE SPSSTILRKL KRLASADIAA FGFKFSFKLD
TLGEAGGATL AQALKEVVDQ AGADVVLIVD EVQHAITSDE GNQMLLALKA ARDAINPRPG
TTGHFLFVGT GSHRALVGEL TARRNQAFAG ATSVAYPVLD REYIDYLLAR LSSEGFTALP
SPDVAIKAFQ ALGHRPEEMI RALRQLHFHL PEGSNPDEHL PTIANTLRSA AADVELMKLE
QLGGLATAIF DRIATTQGDA RGLFSADAAA AYSLAIGREV KVEEAQPVVN ELMASNLIMR
KGHGLYGITD PFVQEMWRER KSLEGKL