| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1710 |
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| Symbol | |
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| ID | 4038513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1851867 |
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| End bp | 1853426 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637977092 |
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| Product | RND efflux system outer membrane lipoprotein NodT |
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| Protein accession | YP_583860 |
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| Protein GI | 94310650 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.733437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCCC AGGGCCGCGT GTTCCGTTGC TGGATGCTGG CCGCGACGAT GCTCGCCGGC
TGCGCGCGCG TTGGCCCGGA TTTCCAGCCG CAGCACGAGA CGTGGAGCGG CCAATGGACC
AGCGAGGCGA TCGGGCAGGC CAGCGAGGCG GGTGACCAAC CGGATATGCG CCAATGGTGG
CAGGTCTTCA ACGACCCGGT GCTCGAACAC CTGATCACCG AGGCCGATGC CAATGACGCC
GGGGTTCGGA TTGCCGGCCT GCGGGTCATG GAAGCCCGGG CGCAACTTGG CATGGCGCTG
GCTGGCCGGT ATCCCCAGAT GCAGCAGGCG GGCGCGGATG CCATGTACGT TCACAGCCGC
CAATCCGGGC CAACTGCGCA AACCGCTCGC GTCTGGGAGT ACAGCGCGGG TGTCGATGTC
GGCTGGGAAC TCGACTTCTG GGGGAAATTC GCCCGGGCGA TCGAGTCCGC CGATGCCGCG
TACTTCGCGG CCCAGGCGAA TCACGAGAAC GTACTGGTAC TGCTTCACGC ACAACTCGCG
CAGACCTATT ACGCATTGCG CACCGCGGAA GCCCGCGTGC GGATAGCGCG GGAGAACGCC
CGACTGCAGA AGCGCAGCTA TGAGATCACC GAGCGATTGT TCAAGGCCGG CGAAAGCGAC
GAACTGGACC TGCAACAAGC CAAGACGCAG TACTTCGGCA CATTGAGCAG CATTCCCGAA
CTGGAGCGGC AGATTGCGCT CTCGCGCAAC GCCGTGGCGA TCCTGCTGGG GAGGCCACCC
GGCCCGATTC CCGAGTTGGG CGAGGCATCG GGCAAGGAGG GCGTGTTGCC CCGGATCGAT
CGGGCGATTC TGCAAGACGT GCCCGCCAAC CTGTTGCTGC GCCGACCGGA CATCCGGGCC
GCCGAGTTCC AGATCGCGGC GCAGTCGGCC CAGATCGGCG TGGCGAAGGC GGACCTGTAT
CCATCGGTGA CGCTCGTCGG CAGCATCGGC TGGTCCGCGA CTTCGCTGCC CGGGACGCAG
AACGGCCTGC TGCTGGTGGG CGGCCCCAGC CTTCGCTGGA ACATCTTCGA CTATGGCCGG
ATCCACAACA ACGTGCGCGT GCAGGATGCC CGGCTCCAGC AACTGATCCT CACCTACCAG
AACGACGTGC GCGTGGCGGC GCGCGAGGCC GACGATGCGG CCAGCGGCCT GCTCAAGGCA
CTCGAACGCG AAGAAATCCT GCGTGAGGCC GCGTATTCTG CGGAACGCTC GCTGACGCTG
GCCAACACCC TGTTCAAGGA GGGGTACTCC GACTTCCAGC GCGTGCTCGA TGCCCAGCGG
GCGTTGTTCG CCCAGCAGGA CGCCTATCTG GTCAATCGCA GCAACGCCGT TGGCTATCTG
ATCGACCTTT ACAAGGCCCT TGGCGGTGGC TGGTACAGCG AGCAGCCGTT GGTCGACCCA
GCCACCCGCG ACCAGATGCG GCAGCGTACC GATTGGGGAG ACCTGCTGGA CGAGCCGCCG
CGCACGCCGC CGACATCCAA TAACACCACG GCCAAAGCCA CCGGGAGCCA ACGCCAATGA
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| Protein sequence | MLPQGRVFRC WMLAATMLAG CARVGPDFQP QHETWSGQWT SEAIGQASEA GDQPDMRQWW
QVFNDPVLEH LITEADANDA GVRIAGLRVM EARAQLGMAL AGRYPQMQQA GADAMYVHSR
QSGPTAQTAR VWEYSAGVDV GWELDFWGKF ARAIESADAA YFAAQANHEN VLVLLHAQLA
QTYYALRTAE ARVRIARENA RLQKRSYEIT ERLFKAGESD ELDLQQAKTQ YFGTLSSIPE
LERQIALSRN AVAILLGRPP GPIPELGEAS GKEGVLPRID RAILQDVPAN LLLRRPDIRA
AEFQIAAQSA QIGVAKADLY PSVTLVGSIG WSATSLPGTQ NGLLLVGGPS LRWNIFDYGR
IHNNVRVQDA RLQQLILTYQ NDVRVAAREA DDAASGLLKA LEREEILREA AYSAERSLTL
ANTLFKEGYS DFQRVLDAQR ALFAQQDAYL VNRSNAVGYL IDLYKALGGG WYSEQPLVDP
ATRDQMRQRT DWGDLLDEPP RTPPTSNNTT AKATGSQRQ
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