| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1703 |
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| Symbol | |
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| ID | 4038506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1846301 |
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| End bp | 1847761 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977085 |
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| Product | RND efflux system outer membrane lipoprotein NodT |
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| Protein accession | YP_583853 |
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| Protein GI | 94310643 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.416377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCC GCACGGTGTC CCGATTGATG CTTCTCGCCA CGCTGGCCGC CGCCGGGTGC
GCGGTCGGGC CGGACTACGT TCGTCCGCCT GTCGATGTTC CGCAGGCCTA CCGCTTCGCG
GACGAAGGTA TCAGCGTGCC GCAGACACCG GCCACGTATT GGTGGTCGCA GATGAACGAT
CCGGTGCTGG ACGGGCTGAT TGCCACAGCG CGGGCCAACA ACAAGGACTT GCTGATTGCC
GCGGCACGGG TCGAGGAGTA CTACGGCCGT GTCATGACCA CCCGGTCTGG CCTGTTCCCT
CAGGTGGGAA TCGAGGCTGG CGGTGGGCGC CAGCGCATCA GCACCACCAA TGGCACGGCG
CTGCCGATCA ACAACCCGTT CAACCAGACG CACGTCGCCG CCACCGCATC CTGGGAAATC
GACCTGTTTG GCCGGATACG CCGCCTGACC GAGGCGGCCA AGGCTGACTG GCAGGCCAGC
GAACTGGCGC GTCGGAGCAC GGAAATCTCG GTGGTCGCCG CGACTGCCAG CGCCTATATC
ACGCTGCGGG ATCTCGATAA CCGCCTGCGT ATCTCGCAAG AAACCCTGGA AAGCCGTCGG
GGCGCGCTTG AGTTGTTCCG GGAGCGCTTC CAGGGCGGCG TGGTCTCCGA GGTCGAGTTC
GCGCAAGCGC GGTCGGAATA CGCATCGGCA CTGACCTCGG TCGAGCAGTT CCGCCAGCAA
GTCGCGCTGC AGGAGGATCT GCTGGCCGGT CTGCTGGGCG AGAATCCGCG TGAAATTCCG
CGCGGCAAGT CGATCTCCGA GTTGACCTTG CCGGGCGTGC CGGTCGGCCT GCCTTCGACG
TTACTGGAGC AGCGGCCGGA CGTGCTCCTG GCCGAGCAGA ATCTCGTGGC GGCCAATGCC
CGCATCGGCG CCGCGCGTGC CGAATACTTC CCGACGATTT CGCTGACCGG CGCGTTCGGC
GCTGCCAGCA CGGCACTGTC GGGGCTGTGG ACCGGTCCGG CACGGGCCTG GTCGTTCGCA
GGGCTCATCA GTATGCCGAT CTTCACCGGT GGCGCGATCG CCGGCGACGT CAAGCAGGCG
GAGGCGATTC AGACGCAGTC GCTGCAGGCC TACCAGCAAT CCATCCAGAC AGCGTTCCGG
GAAGTGGCGG ATGCGCTGGT CAGCGTGCAG CGTACGCGCG ATCAGCTCAA TGCCAAGACC
GACCAGGTCG ATGCGCTGGG CCGTTACGCT TCGCTGGCAC GAGATCGCTA CGAAGGCGGT
TATACGAGCT ATCTTGAAGT GCTGGATTCC GAGCGCGCGC TGTTCGCCGC GCAACTCGAC
CAGTCCACCC TCATTGGTTC GGAGTTTGGC CAACTTGTCC AGCTCTACAA GGCGCTGGGT
GGTGGCTGGC CCGTGGAGTC GGAAGCAGCA CAGGCGCCTC AGGCAAGCCT GAGTCAACCG
GAAACCCGTA ACAAGGAGTG A
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| Protein sequence | MKRRTVSRLM LLATLAAAGC AVGPDYVRPP VDVPQAYRFA DEGISVPQTP ATYWWSQMND
PVLDGLIATA RANNKDLLIA AARVEEYYGR VMTTRSGLFP QVGIEAGGGR QRISTTNGTA
LPINNPFNQT HVAATASWEI DLFGRIRRLT EAAKADWQAS ELARRSTEIS VVAATASAYI
TLRDLDNRLR ISQETLESRR GALELFRERF QGGVVSEVEF AQARSEYASA LTSVEQFRQQ
VALQEDLLAG LLGENPREIP RGKSISELTL PGVPVGLPST LLEQRPDVLL AEQNLVAANA
RIGAARAEYF PTISLTGAFG AASTALSGLW TGPARAWSFA GLISMPIFTG GAIAGDVKQA
EAIQTQSLQA YQQSIQTAFR EVADALVSVQ RTRDQLNAKT DQVDALGRYA SLARDRYEGG
YTSYLEVLDS ERALFAAQLD QSTLIGSEFG QLVQLYKALG GGWPVESEAA QAPQASLSQP
ETRNKE
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