| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1665 |
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| Symbol | |
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| ID | 4038468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1799751 |
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| End bp | 1802540 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637977047 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_583815 |
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| Protein GI | 94310605 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAACC GGGGAGCCCG TGGCTTTCGT GATTCCGCGA ATTGGAGGCA TAACAAAACA
GTTCTGCTTT CCGCAATACT GAGTGCGCTA GGCATTGCCG TACCAGCGTT GCAGGCTGTG
GCGGCTCCAG TCAACAGTGA CAAGCAGGTG TCTGGCGGCG CGATTCTGGC GTACAACTTC
GATAGCAAAC TGCTTCTTGG TTCATCGCTC GGTGTGGCCA ACATCGAACG ATTCAACAAG
GCAAGTTCGG TAGAGCCCGG CGTTTATCCA GTCGACATCT ACGTCAATGG TGTTTTCGCA
GCTCGCAAGC CGATCGATTT CCGAGTCATG GAAGGCGATG ATGTTGGCCC TTGTTTGAAC
GACGAGTTCC TGACCTCCAG TGGCATACTC CTTGATGGCG GCAATGCAAC TGGAAGCACA
TCGATTCGGT CGCTTCCCCC AACCAGGGAG CAGGCTGCGC CCGCTCCGGA AGCTCTGGCA
CCTGTTCCTC AAGCCGGGAA ATGTGTGCCG CTTGAGCGCC GCGTGCCGGG GGCATCTACT
TCGTTTGACC TTCCCCGCTT GCGCCTGGAT ATCAGCGTTC CTCAGGCACA GATGAAACAA
GTGCCACGCG GTTTCGTCGA CTCGGCCAAT CTCAATGCCG GGCAGACGAT GGGATATGTC
AACTACGACA CCAACTACTA CACTTCGTCA GCCTATGGCG CTCGGACAAA CTCCGCTTAC
GCAGGCATAA ATGCGGGTCT GAACGTTGGA CTGTGGCGTC TTCACCAACA ATCGACTTAC
ACGTACACAA GTGGACTTGG GGAAAGCCGC TCTAATTGGA ACAATATCCG CACCTATGCG
GAGCGGCCAC TAGTCTCACT GCGCAGCAAC CTCGTCGTTG GGCAGAGCTT CACCGGGGGC
AATCTCCTAA GCGCGGTGGG ATATACCGGC GTGCACATCG AAAGCGATGA CCGTATGTTG
TCGGATTCAA TGCGAGGGTA TGCGCCTGTG GTCAACGGGG TGGCGAATAC GAACGCGCGC
GTCGTAGTCA GCCAGAACGG TCAAATGATC TATCAGACCA CGGTAGCGCC AGGTCCGTTT
TCAATCAAAG ATCTCAATCC GACAAGCTAC CAAGGAAATC TGACCGTACA GGTATTTGAA
GCCAATGGGG AAGTCACCAC GTTCGCTGTG CCGTTTTCGG CGGTACCGAA TTCACTTCGC
CCTGGCCTGT CGCACTACAG TCTGACGCTT GGCCAAGTAC GACAGATGGC AGACTCGCAC
GCGAAATTTG TCGATGTCAC TTATGAACGC GGTGTGACCA ATTTACTGAC GGCAAACGGC
GGCGCGCGAG TTTCACCTGA CTATCAGTCT GTGCTTGGCG GAGTCGTGTT TGGCACAAAC
CTCGGAGCAT TCGGTCTGAA CACAGCTTGG TCGAGAGCGC GAGATCCGCA AGGCAATCAG
CTGAACGGCT GGCGTAGCTC CGTCAACTAC AGTCATACGA TCCAGCAAAC AATGACGACG
TTCACGTTGG CAGGCTATCG CTATTCAACA AAGGGCTATC GAGATTTTAT TGATGCGATC
AACTCTCGTG CAGCTTGGCA GAACGGAACA AATTGGACTT CTGGTACTTA TAATCAGCGG
GATCAATTCA CCGTCAATGC CAATCAGAAT CTCAACCAAT TCGGTTCATT GTCTTTATCG
GCTTCGACCA GTAGCTTTTA CGGTTCAAGA TCACGCGATA CGCAATTCCA GCTCAGCTAC
AACAACCATT ATCGGCGCAT CAGCTACAAT TTGTCGGTAA TCCGCCAACA AACGGGCATC
CTCTACGGTG GGAATACTCC TGGCCTGATT GGCGGCGCGA TGCCACCAGG TTCGCCGCCT
AGGTTGACCA ATGCCGTGAT GTTTACGGTT TCCATACCTC TCGATTTTGG GGCTCGCTCT
GCTTCAGTAT CTGGCAGCGT GGCACACAGC ACGGATCAAG GCGTGTCATA TCAGACATCC
GTAAGCGGCG TCGCCGATAC GGCACAGACG CTGAGCTATG GATTCGCTGT CTCCGGGCAG
ACCCAAAACG AATCGCGCAG CTTCAGTGGC AACCTGCAGA AGAACCTGTC CGCAGTAACA
GTCGGTGCAA ACTACTCGCA GGGCAACAAC TATTGGCAGG CTGGTGCGAA TGCACGCGGC
GCCGCAGTTG TGCACGGAGG TGGCATCACC CTTGGGAGAT ACCTCAGCGA TACCTTCGGA
GTCATCGAAG CAAAAGGTGC GGAAGGTGCG GCAGTGCGTA ATGCCCCAGG GACATTCGTG
GACCGGTTCG GCTTCGCAAT AGTGCCTTCG CTAACTCCAT ATCGCTACAA CGACGTGGCG
CTCGATTCCA AGGGAATCAA TCCAAACGCA GAACTAACTG GCAACCAAGT CAGGATCGCG
CCATATGCCG GATCCTCTGT ACTGCTCAAG TTCACGACTC TCACTGGTCA TGCAGTGCTG
ATAACCGCTA CGGGTGCAGA TGGAGAACCG TTGCCGTTTG GCGCTACTGT TCTCGACAGT
ACTGGCGCGA CGATTGGCGT CGTTGGCCAA GGCAATCAAG TCTATGCGCG TGTGCCAGAC
GACCGAGGCA CACTGACCGT CAAATGGGGC GAACGGAAGG AGGATCTGTG CGTCATCAGC
TATGACCTCA AGACAGCAGA TGCGAAGAAC GTAATGCAGC GCTTTGAGGG GAAATGCCGT
TCAGCTCACA CGGAAAAAAC TGCCGTGCGA GTTCAAGAGC AAATGTCAAT GGCAAATACA
TCTGCCGAAA CCGGCAGGAA CTCGGAATAA
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| Protein sequence | MVNRGARGFR DSANWRHNKT VLLSAILSAL GIAVPALQAV AAPVNSDKQV SGGAILAYNF
DSKLLLGSSL GVANIERFNK ASSVEPGVYP VDIYVNGVFA ARKPIDFRVM EGDDVGPCLN
DEFLTSSGIL LDGGNATGST SIRSLPPTRE QAAPAPEALA PVPQAGKCVP LERRVPGAST
SFDLPRLRLD ISVPQAQMKQ VPRGFVDSAN LNAGQTMGYV NYDTNYYTSS AYGARTNSAY
AGINAGLNVG LWRLHQQSTY TYTSGLGESR SNWNNIRTYA ERPLVSLRSN LVVGQSFTGG
NLLSAVGYTG VHIESDDRML SDSMRGYAPV VNGVANTNAR VVVSQNGQMI YQTTVAPGPF
SIKDLNPTSY QGNLTVQVFE ANGEVTTFAV PFSAVPNSLR PGLSHYSLTL GQVRQMADSH
AKFVDVTYER GVTNLLTANG GARVSPDYQS VLGGVVFGTN LGAFGLNTAW SRARDPQGNQ
LNGWRSSVNY SHTIQQTMTT FTLAGYRYST KGYRDFIDAI NSRAAWQNGT NWTSGTYNQR
DQFTVNANQN LNQFGSLSLS ASTSSFYGSR SRDTQFQLSY NNHYRRISYN LSVIRQQTGI
LYGGNTPGLI GGAMPPGSPP RLTNAVMFTV SIPLDFGARS ASVSGSVAHS TDQGVSYQTS
VSGVADTAQT LSYGFAVSGQ TQNESRSFSG NLQKNLSAVT VGANYSQGNN YWQAGANARG
AAVVHGGGIT LGRYLSDTFG VIEAKGAEGA AVRNAPGTFV DRFGFAIVPS LTPYRYNDVA
LDSKGINPNA ELTGNQVRIA PYAGSSVLLK FTTLTGHAVL ITATGADGEP LPFGATVLDS
TGATIGVVGQ GNQVYARVPD DRGTLTVKWG ERKEDLCVIS YDLKTADAKN VMQRFEGKCR
SAHTEKTAVR VQEQMSMANT SAETGRNSE
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