Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1647 |
Symbol | |
ID | 4038450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1782196 |
End bp | 1782924 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637977031 |
Product | hypothetical protein |
Protein accession | YP_583799 |
Protein GI | 94310589 |
COG category | [S] Function unknown |
COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.042207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCTTG TGCGCCACCC TGACCTGCTC GACCGCATGG CCGCCCAGTA CGCATTGGGC GTGCTGCGCG GTGGCGCGCG CCGTCGCATG GAGCAAATGG CGCGCCAGGA GCCCGCCGTG CGCGTGGCGA TTGCCCATTG GCAGGCACGA CTGGCTGGGG TGGCCGAGCT GCAAGCGCGG GCCGTTCCCG TAGAAGCCGT CTGGTGCGGC ATCGAGCGAC GGCTAGGCTG GAAAGCCGAT CCCGCCGAGG CACAGCCGAC ACGCACGACT GGCTGGCGTC ACGTCTGGCA GGCCGCGAGC TTCTGGCGAG GCGCCACGGC GGCGATGACG GTCATCGCGC TGATCGCCGT TATTGCCACC ATAGGCCTCG GGCCCGAGCG ACGGCCGAGT CCCTCCACAG TGGTTGCCTT GCTGCAGTCG CAACAATCCC GGGCTGCCAT GCTGGTCAGT TGGGATCCAA CCGGCCCCGC CCTGGTGGTT CGCAGGCTCG ACGACCTGAC GCTGACAAAC CAGCAGGTCC TCCAGCTTTG GGCGCTCCCC GTGGATGGCA AGCCTCAGTC GCTGGGCGTG ATTGGCCGCG CGCGCCAGGT TCGCCTGCCG CTGGCCACGC TGCCCGCCAA CGTGCCGACC CTGGCGGTCA GCATCGAGCC ACTCGGCGGG TCCACCAATC CGGATGGGCC GAGCGGGCCA GTCGTGTTCC ATGGCGCCTT GCTGAAATCC CCGCGCTGA
|
Protein sequence | MNLVRHPDLL DRMAAQYALG VLRGGARRRM EQMARQEPAV RVAIAHWQAR LAGVAELQAR AVPVEAVWCG IERRLGWKAD PAEAQPTRTT GWRHVWQAAS FWRGATAAMT VIALIAVIAT IGLGPERRPS PSTVVALLQS QQSRAAMLVS WDPTGPALVV RRLDDLTLTN QQVLQLWALP VDGKPQSLGV IGRARQVRLP LATLPANVPT LAVSIEPLGG STNPDGPSGP VVFHGALLKS PR
|
| |