Gene Rmet_1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1647 
Symbol 
ID4038450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1782196 
End bp1782924 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content69% 
IMG OID637977031 
Producthypothetical protein 
Protein accessionYP_583799 
Protein GI94310589 
COG category[S] Function unknown 
COG ID[COG5343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.042207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTG TGCGCCACCC TGACCTGCTC GACCGCATGG CCGCCCAGTA CGCATTGGGC 
GTGCTGCGCG GTGGCGCGCG CCGTCGCATG GAGCAAATGG CGCGCCAGGA GCCCGCCGTG
CGCGTGGCGA TTGCCCATTG GCAGGCACGA CTGGCTGGGG TGGCCGAGCT GCAAGCGCGG
GCCGTTCCCG TAGAAGCCGT CTGGTGCGGC ATCGAGCGAC GGCTAGGCTG GAAAGCCGAT
CCCGCCGAGG CACAGCCGAC ACGCACGACT GGCTGGCGTC ACGTCTGGCA GGCCGCGAGC
TTCTGGCGAG GCGCCACGGC GGCGATGACG GTCATCGCGC TGATCGCCGT TATTGCCACC
ATAGGCCTCG GGCCCGAGCG ACGGCCGAGT CCCTCCACAG TGGTTGCCTT GCTGCAGTCG
CAACAATCCC GGGCTGCCAT GCTGGTCAGT TGGGATCCAA CCGGCCCCGC CCTGGTGGTT
CGCAGGCTCG ACGACCTGAC GCTGACAAAC CAGCAGGTCC TCCAGCTTTG GGCGCTCCCC
GTGGATGGCA AGCCTCAGTC GCTGGGCGTG ATTGGCCGCG CGCGCCAGGT TCGCCTGCCG
CTGGCCACGC TGCCCGCCAA CGTGCCGACC CTGGCGGTCA GCATCGAGCC ACTCGGCGGG
TCCACCAATC CGGATGGGCC GAGCGGGCCA GTCGTGTTCC ATGGCGCCTT GCTGAAATCC
CCGCGCTGA
 
Protein sequence
MNLVRHPDLL DRMAAQYALG VLRGGARRRM EQMARQEPAV RVAIAHWQAR LAGVAELQAR 
AVPVEAVWCG IERRLGWKAD PAEAQPTRTT GWRHVWQAAS FWRGATAAMT VIALIAVIAT
IGLGPERRPS PSTVVALLQS QQSRAAMLVS WDPTGPALVV RRLDDLTLTN QQVLQLWALP
VDGKPQSLGV IGRARQVRLP LATLPANVPT LAVSIEPLGG STNPDGPSGP VVFHGALLKS
PR