| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1645 |
|---|
| Symbol | |
|---|
| ID | 4038448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1777996 |
|---|
| End bp | 1780365 |
|---|
| Gene Length | 2370 bp |
|---|
| Protein Length | 789 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637977029 |
|---|
| Product | DNA polymerase II |
|---|
| Protein accession | YP_583797 |
|---|
| Protein GI | 94310587 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0528782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCACTAC AGCAGGGTTT TCTCCTGACC CGTCACTGGC GCGACACGCC CGCAGGCACG
GAAGTCGAGT TCTGGCTCGC CACCGATGAG GGCCCGCGCC GACTGCGCCT GCCCCGGCAG
CCATCCACGG CGTTCATACC GGCCGCGCAA CGCGAGACGG CCGAGGCGCT GCTGCGTGGC
GAGCGCGATG TCGAGTTCCG CCCGCTGAAC TTGCAGGACT TCCAGCGACG CCCGGTGACA
GGGATCTACT GCGACCAGCA CCGTCAGCTC ATGCGGATTG AAAAGGCGCT CCGCGACGCG
GGCGTCAGCG TCTACGAGGC CGACGTCCGC CCGCCAGAGC GCTATCTGAT GGAGCGGTTC
ATCACCGCCC CGGTCTGGTT CGACGGCCAG CCCGGGGCGG ACGGCGTGCT GCGCGACGCC
CAGATGAAGC CGGCGGCCGG CTACCGGCCC AAGCTGCGCC TGGTCTCGCT CGACATCGAA
ACTAATGCGT TCGGCGAACT CTATTCCATC GCGCTGGAGG GCTGTGGCGA GCGGCAGGTC
TACATGCTGG GCCCCACCCC CGCGCAACCG GCGGCGGATA TCGACTTCGC GCTCGAGTAC
CACGCAACCC GTCCTCTGCT GCTGGAGGCC CTCAACGACT GGTTGGCCCG CCACGATCCC
GACGCGATCA TCGGCTGGAA TCTGGTGCAA TTCGACCTGC GTGTGCTGCG CGAACACGCG
CGCCAGCACC AGATTCCGCT GCGCCTGGGT CGTGGCGGCG CGGAACTGGA GTGGCGCGAG
CACAACCAGC AGCAGCACTA CTTCGCGGCA GCGGCGGGCC GGCTGATCAT CGACGGCATC
GAGGCCCTTC GCTCGGCCAC CTGGAACTTC CCGTCGTTCA GTCTCGAATC CGTGGCCCGG
ACGCTGCTGG GCGAAGGCAA GGCTATCGAC AACCCGTACG ACCGCATGGA TGCGATCGAC
CGGATGTTCG CCGAAGACAA GCCGGCACTG GCCCGCTACA ACCTCCGCGA CTGCGAACTG
GTCACGCGCA TTTTCGAGAA AGCGGAGCTG CTTCCCTTCC TGTTGGAACG CGCGACGGTG
ACCGGCCTGC CGGCGGATCG TAGTGGCGGT TCGGTCGCGG CTTTCACGCA TCTCTACATG
CCGCTGATGC ATCGGCAAGG CTACGTCGCG CCTAGTCTTG GCGAGAAGGC GCCGGAAGCC
AGCCCTGGTG GCTTTGTCAT GGATTCCCGC CCCGGACTCT ATGAATCGGT GCTCGTGCTC
GACTACAAGA GCCTGTATCC GTCGATCATC CGCACGTTCC TGATTGACCC GATCGGACTG
GTCGAGGGCC TGGCCCACCC TGACGATGCC GAATCGGTGC CCGGCTTCCG GGGCGCGCGG
TTCTCACGCA CGAAGCACTG CCTGCCGGCC ATCGTCGCGC GCGTGTGGCA GGGCCGCGAA
GCCGCCAAGC GAGACAAGAA CAAGCCGCTC TCGCAGGCGC TCAAGATCAT CATGAACGCG
TTCTACGGCG TGCTGGGTTC CAGCGGCTGC CGCTTCTTCG ACCCACGACT GGCGTCGTCG
ATCACGATGC GCGGCCACGA GATCATGCGC CAGACGCGCG CGCTTATCGA GGCGCGGGGC
TACGAGGTGA TCTACGGCGA CACCGATTCG ACGTTCGTGT GGCTGCGTCG CGCGAGGTCT
GAGGCCGACG CCGCGCAGAT CGGCCGCAGC CTGGTGGCGT ACGTGAACGA CTGGTGGCGA
GATCATCTGT GGCAGACCTA CGGCCTGGAG TCCGCGCTCG AGCTGCAGTT CGAGACCCAT
TTCCGGCGCT TCCTGATGCC GACCATCCGT GGCGCCGATC TCGGCAGCAA GAAGCGCTAC
GCGGGCCAGG TGATGCGCGC CGACGGCACG GCCGAGATGG TGTTCAAGGG CCTGGAAACC
GTGCGCACCG ACTGGTCACC GCTGGCGCAG CAGTTCCAGC AGACGCTCTA CGCGAAGATC
TTCAACCGCG AGCCCTATCG GGACTATGTG CGCGACACCG TCCACCGCAC GCTCGCCGGC
GAACTCGACG AGCAGTTGAT CTACCGTAAG CGCCTGCGCC GCCAGCTCGA CGAATACCAG
CGCAACGTGC CACCGCACGT ACGGGCGGCA CGCATCGCCG ACGAGTACAA CGTACTGCAC
GGCAGGCCGC GCCAGTACCA GCGTGGCGGC TGGATCAGCT ACCTGATGAC GGTGGCCGGC
CCCGAACCAC TGGAAACACG CGCATCGCCA ATCGACTATG AGCACTACGT CACACGACAG
TTGCAGCCGA TTGCCGATGC GATCCTGCCG TTTCTGGACG ACGATTTCGA GACATTGCTG
ACTGGGCAAA TGACGCTGTT TCCCCAGTAA
|
|---|
| Protein sequence | MALQQGFLLT RHWRDTPAGT EVEFWLATDE GPRRLRLPRQ PSTAFIPAAQ RETAEALLRG
ERDVEFRPLN LQDFQRRPVT GIYCDQHRQL MRIEKALRDA GVSVYEADVR PPERYLMERF
ITAPVWFDGQ PGADGVLRDA QMKPAAGYRP KLRLVSLDIE TNAFGELYSI ALEGCGERQV
YMLGPTPAQP AADIDFALEY HATRPLLLEA LNDWLARHDP DAIIGWNLVQ FDLRVLREHA
RQHQIPLRLG RGGAELEWRE HNQQQHYFAA AAGRLIIDGI EALRSATWNF PSFSLESVAR
TLLGEGKAID NPYDRMDAID RMFAEDKPAL ARYNLRDCEL VTRIFEKAEL LPFLLERATV
TGLPADRSGG SVAAFTHLYM PLMHRQGYVA PSLGEKAPEA SPGGFVMDSR PGLYESVLVL
DYKSLYPSII RTFLIDPIGL VEGLAHPDDA ESVPGFRGAR FSRTKHCLPA IVARVWQGRE
AAKRDKNKPL SQALKIIMNA FYGVLGSSGC RFFDPRLASS ITMRGHEIMR QTRALIEARG
YEVIYGDTDS TFVWLRRARS EADAAQIGRS LVAYVNDWWR DHLWQTYGLE SALELQFETH
FRRFLMPTIR GADLGSKKRY AGQVMRADGT AEMVFKGLET VRTDWSPLAQ QFQQTLYAKI
FNREPYRDYV RDTVHRTLAG ELDEQLIYRK RLRRQLDEYQ RNVPPHVRAA RIADEYNVLH
GRPRQYQRGG WISYLMTVAG PEPLETRASP IDYEHYVTRQ LQPIADAILP FLDDDFETLL
TGQMTLFPQ
|
|---|
| |