| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1639 |
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| Symbol | |
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| ID | 4038442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1771127 |
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| End bp | 1772230 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977023 |
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| Product | porin |
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| Protein accession | YP_583791 |
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| Protein GI | 94310581 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0946277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACCC GTATAACCTG CCTGGCCGCG CTGGCCATTC TGCCCACCCT GCCCGCCACG
GCCCACGCCG ACGGCAGCAT TACGCTCTAT GGCGTCGTCG ATGCCGGCGT GGAATACCTG
ACCCACGTAC CGAACACCGC CGGCGGTAGC AACAGCGTTG TCCGCCTGTC GGCCGGCAAC
CTGTCGACCT CGCGTTGGGG CCTGCGTGGC AGCGAGGATC TTGGTGGTGG CCTGAAAGCC
ATCTTCACGC TGGAGAACGG TTTCGACCTG GACACCGGCA ACGCCAACCA GGCCGGCCGG
CTGTTCGGCC GCCAGGCATT CGTGGGCCTG CAGAACCAGT ACGGATCGCT GACGCTGGGT
CGTCATCAGA CCGTACTCTA TGACTTCTCG CTCACGTATG ACCCGATGGC CATCGCCACG
CGCTACTCGG TGCTGATGCA CGACAAGTGG ATGTCGGGCC GGGCCGACAA CTCGCTGAAG
CTGACCGGCA AGCTTGGCGC GGTCTACTAC GGGCTGTTCT ACAGCACCGG CTACGACAGC
AAGGCCGGTG GCGAGATTCC GGGCGACTAC AAGGCTGGCC GCAACTGGTC GGCCGCGGCC
GGCTACGATG CGGGACCGCT GTCGGCGCGC GTGGTCTACG ACGAAGTGCG CGGCAGCACC
GTTGCTACCG ATGACAATCG CGAGCGCCGC GCCAGCATCG GCGCCAGCTA CAACTTCGGC
CGAGGTCGGG CTTTTGCCGG CTACCGCTGG TACTACGGCG ATTTCGCCAC CAGCTCGCTG
CGCACCAACC TGTACTGGCT TGGCGCGAGC TACCAGGTGA CGCCTGCGGT CACCGTGACC
GGCGCAGCCT ACTACACCGA CGTGCGCAAC AGCAGCGGCG ATCCGTACAG CTTCGTGCTT
TCGGGTACCT ATGCGTTCTC GAAGCGTACG GACCTCTACG CCATTGCCGC CTACGCCCAG
AACAGCAACG GATCGGCTAT GGGACTTTCC GGCTTCGGCC CGTCGCTGAA CGCCAACGCG
ACCACGCTGA CGGCCGCCAC CGAACAGGTC GGTGCGGGCC AGAACCAGTT CGGCGCGATC
ATCGGCATCC GCCATCGCTT CTGA
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| Protein sequence | MKTRITCLAA LAILPTLPAT AHADGSITLY GVVDAGVEYL THVPNTAGGS NSVVRLSAGN
LSTSRWGLRG SEDLGGGLKA IFTLENGFDL DTGNANQAGR LFGRQAFVGL QNQYGSLTLG
RHQTVLYDFS LTYDPMAIAT RYSVLMHDKW MSGRADNSLK LTGKLGAVYY GLFYSTGYDS
KAGGEIPGDY KAGRNWSAAA GYDAGPLSAR VVYDEVRGST VATDDNRERR ASIGASYNFG
RGRAFAGYRW YYGDFATSSL RTNLYWLGAS YQVTPAVTVT GAAYYTDVRN SSGDPYSFVL
SGTYAFSKRT DLYAIAAYAQ NSNGSAMGLS GFGPSLNANA TTLTAATEQV GAGQNQFGAI
IGIRHRF
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