| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1636 |
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| Symbol | |
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| ID | 4038439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1764891 |
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| End bp | 1766570 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637977020 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_583788 |
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| Protein GI | 94310578 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.929542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTA ACGCTTCTTC TCCCGTCGCC CGCACTGGCG GACGTGTCCT CGTCGATCAA
CTTCGCATCC ACGGCACCGA GCGCATTTTT TGCGTGCCGG GGGAGAGCTT TCTGGATGTT
CTGGACGCGC TGCATGACCA GCCGGCGATC GACCTGATCG TTACCAAGCA CGAAGGGGCG
GCCGCCAACA TGGCGGAGGC GGACGGCAAG CTGACCGGGC GTCCCGGCAT CTGCTTCGTG
ACGCGCGGAC CGGGCGCCAC GCACGCAAGC TGCGGCGTGC ATATCGCCGC GCAGGATTCC
ACGCCGATGA TCCTGTTCGT TGGCCAGATC GCGCGCGAGC ACAAGGGGCG GGAAGCGTTC
CAGGAAGTGG ATTACGCCGC GGTCTTCGGC TCGATGGCCA AGTGGGCGGC CGAAATCGAT
GATCCCGCGC GGATTCCGGA GATGGTGGCC CGTGCCTTCC AGGTGGCTAC GTCGGGCCGT
CCCGGCCCGG TGGTGCTGGC ATTGCCGGAG GACGTACTCG ACAACATGGT GGACTGCGTC
GACGCGGCGC CGTATCGCGC GGTGGCAGCG GCCCCGCGTG CCGAAGATGC CCAGGCGCTG
GCCTCGGCCC TGCGCGCGGC GGAGCGTCCG CTCGTGATCG CCGGTGGCGC CAACTGGACG
GAAGCCACTG TGCGCGACTT CGCGGCCTTC GTGCACGCAT GGGATTTGCC GGTGGCCTGC
GCCTTCCGCC GCCAGGACGT GCTCGACAAT CGTGATCCGC ATTACGTCGG GCACCTGAGC
CTGGGCGTCA ATCCGAAGCT TGCTGAGCGC GTGGAAACCG CCGACCTGAT CGTCGCATTC
GGCACGCGCC TCGGGGACAT CGCCACCGAT GGCTACACAA TGCTCGAGGT GCCGCGGCCG
AAACAGAAGC TCGTGCATAT CCATGCCGAC AGCTTCGAGT TGGGCCGCGT CTACCAGGCC
GCGCTGCCGA TCCATGCCGG GGTGGAACCC GGCGCGGCGA TGCTCGCATC GCTGCAGCCG
CCAGCGCAGG TACCGTGGAA GTCGTGGACG GCGGGCGCGC GCGCGGATCA CGAGGCCTTT
GTCACACCGC CGAAGCCGCA TTCGGAATTG AGCGGCGTGA ATATGTCCGC CGCGATTTCG
CACCTGAGCA GCGTGCTGCC CGAGGATTCG GTCGTGACCA ACGGTGCAGG CAACTATGCC
GTCTGGCTGC ACCGCTTCTA CGCCTACAAG CGCCCCCGTA CCGAACTGGC GCCGACCTGT
GGCGCGATGG GCTATGGCCT GCCGGCGGCG ATCGCAGCCA AGTTGCGTCA TCCGGAAAAG
ACCGTGGTCT GTCTGGCCGG CGACGGCTGC TTCCTGATGT ACCCGCAGGA GATCGCCACC
GCTGCGGCGC ATGGCGTCAA CCTGATCGTG GTGGTGGTCA ACAACCGTAT GTACGGCACG
ATCCGGATGC ATCAGGAGCG CCGCTACCCG GGCCGTCAAA GCGGCACGAC GATCGTCAAT
CCGGATTTCG TTGGCATGGC GCGCGCCTGC GGCGCCTGGG CCGAGCGCGT GGAGAAAACC
GAGGATTTCG CGGCGGCCTT CGAGCGGGCC CGCAATGCCG GCAAGCCCGC CGTGCTGGAA
CTGCTGACCG ACCCGCTTCA GATCACGCCC GCCATGCGGG TGACCGAAAT GCCGACCTGA
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| Protein sequence | MTANASSPVA RTGGRVLVDQ LRIHGTERIF CVPGESFLDV LDALHDQPAI DLIVTKHEGA
AANMAEADGK LTGRPGICFV TRGPGATHAS CGVHIAAQDS TPMILFVGQI AREHKGREAF
QEVDYAAVFG SMAKWAAEID DPARIPEMVA RAFQVATSGR PGPVVLALPE DVLDNMVDCV
DAAPYRAVAA APRAEDAQAL ASALRAAERP LVIAGGANWT EATVRDFAAF VHAWDLPVAC
AFRRQDVLDN RDPHYVGHLS LGVNPKLAER VETADLIVAF GTRLGDIATD GYTMLEVPRP
KQKLVHIHAD SFELGRVYQA ALPIHAGVEP GAAMLASLQP PAQVPWKSWT AGARADHEAF
VTPPKPHSEL SGVNMSAAIS HLSSVLPEDS VVTNGAGNYA VWLHRFYAYK RPRTELAPTC
GAMGYGLPAA IAAKLRHPEK TVVCLAGDGC FLMYPQEIAT AAAHGVNLIV VVVNNRMYGT
IRMHQERRYP GRQSGTTIVN PDFVGMARAC GAWAERVEKT EDFAAAFERA RNAGKPAVLE
LLTDPLQITP AMRVTEMPT
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