Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1626 |
Symbol | |
ID | 4038429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1754314 |
End bp | 1755750 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637977010 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_583778 |
Protein GI | 94310568 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACAG GCAGCCTGAG GCTGCAGATC ACGCTCTGGC TGCTGATACC GCTGCTGGGG CTGCTGGCAT TCGACGCGTG GCTGACCGAT CGGCGCGCGA TGTCCGCGGC CCACCAGGCA TTCGACCGCA CGCTGGCCGC ATCGCTCAAG TCCATGCGCG AAGGGATTTC GCTGCGCGAC GGACGCGTCG AAGTGGAAAT CCCCAATCTG GCCCTGGAAG TCTTCGACGC CGAGGATGGC TCGCGCGTCT ACTACCAGAT TCGCGACGAG CGTGGCACGA CGATCACCGG CTATGAAGGG CTGCCGATGC CGGAAGGACC GGTGAATTCG CTCTATCGCA CCCAGTTCTA CGACGCCGAG TACCTTGGCG TGCCCGTCCG CATGGCAGCC ATGCCACTGC CGCTGCACGA CGTCCGCTCG GCCCGCACGC AAATGGTCTG GGTGCTGCTG GCCGAATCGA CCGAGCCGCG CGAGCAGCTT GCCAGCGACA TCCTGGTCGG CTCGCTGCTG CAGGAACTGA TGCTGATCAG CCTGGCGCTG GGCATCGTCT GGCTTGGCGT GCGGCGGGGC CTGCTGCCGC TGCAACGGCT GTCCGACGCC ATGTCCGCAC GCGGCCCCGA CGATCTGGAG CCATTGGAAG ACACCGCGCT GCCGGTCGAA ATGAAGCCAC TGGTGGCCGC AGTGAACCAG TATGTGGCCC GGCTGCACCG CATGATAGAA GGCCGCAAGC GTTTCTTTGC CGATGCCGCG CACCAACTCA AGACGCCGTT GGCCATCATC CAGGCCGAAT CGGAACTCGC ACTGCGCGAG AAGGACCTGC CGAGCGTGCG CGCGCACGTC GAGCGGCTGC ATGGATCCGT GCAGCAGGCC GCCAAGGAAG TCGCCCAGCT GCTGTCGCTG TCGCGGCTCG AGCCAGACAG CGGCTACGCG CCCACGCTGC GGCACCTGCG ATTGGATACG CTGGCGCAGA ACGTGGCGCT TGAATGGGCG CCGCTGGCCC GGCGCGCGGG GGTGGATCTG GGTTTCGAGG GTCGCGGCCC GGCCGACATC GACGGCCAGA CCGAACTGCT GCAGGAACTG CTCGGGAATC TGATCGACAA CGCTATCCGC TATGCGGGCG CCGGCGCGAT GGTCACGGTG CGCGTCGACG GGCAACGGCT GGCCGTAGAG GACAACGGTC CCGGCGTGCC CGCGTTCGAG CGCGAGTCGA TCTTCAAGCG CTTCTATCGT GGAGAGTCGA GCGCTAGCCG CGATGGCAGC GGCCTGGGGC TGTCGATCGT GCGGGAGATC GCCCGCATTC ATGGCGCCGC CGTCGCGCTG GAAAGCACGC CGGGCGGCGG CCTGACCGTG GTGGTTACTT TCCCTGCGCC TGCGCTTGCG TCTGGGCCAG GGCCGGCTTC GACAGATTCC CCCGGGCGCG CTGCAGAAAG CCGATGA
|
Protein sequence | MKTGSLRLQI TLWLLIPLLG LLAFDAWLTD RRAMSAAHQA FDRTLAASLK SMREGISLRD GRVEVEIPNL ALEVFDAEDG SRVYYQIRDE RGTTITGYEG LPMPEGPVNS LYRTQFYDAE YLGVPVRMAA MPLPLHDVRS ARTQMVWVLL AESTEPREQL ASDILVGSLL QELMLISLAL GIVWLGVRRG LLPLQRLSDA MSARGPDDLE PLEDTALPVE MKPLVAAVNQ YVARLHRMIE GRKRFFADAA HQLKTPLAII QAESELALRE KDLPSVRAHV ERLHGSVQQA AKEVAQLLSL SRLEPDSGYA PTLRHLRLDT LAQNVALEWA PLARRAGVDL GFEGRGPADI DGQTELLQEL LGNLIDNAIR YAGAGAMVTV RVDGQRLAVE DNGPGVPAFE RESIFKRFYR GESSASRDGS GLGLSIVREI ARIHGAAVAL ESTPGGGLTV VVTFPAPALA SGPGPASTDS PGRAAESR
|
| |