Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1624 |
Symbol | |
ID | 4038427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1752245 |
End bp | 1753843 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637977008 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_583776 |
Protein GI | 94310566 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.594249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATAA TAAGCACGCT TATTAATCTG CGCCAGCCCT TCCAGCCCCC CCCAATGTCC TCCGTGGTTT CCGGCGCGGC ACAGCCAGCC GCCACCCCGC TCAACCGGCC GATGATCACC CTTTCGATCA TGCTGGCCAC GCTGATCCAG ACGCTCGACA GCACCATCGC CAACGTGGCC CTGCCGCACA TGCAGGGTAC GCTTTCGGCC TCGCAGGACG AAATCACATG GGTGCTGACT TCCTACATCG TCGCCGCAGC CATCGCCACG CCGCTGACCG GCTGGCTGTC CGACCAGCTC GGCGTCAAGC GGCTGCTGGC TATCTCGATC GGCGGATTTA CCGTGGCTTC GGCGCTGTGC GGGATGGCGG ACTCCCTCAC CCAGATCGTG GCCGCGCGGC TGCTGCAAGG GGTTTTTGGG GCGGCGCTGG TGCCGCTGTC CCAGTCGATC CTGCTCGATA TCAATCCACC GTCGCGCCAG GGGCAGGCCA TGGCCGTGTG GGGCATGGGC GTGATGGTCG GGCCAATTCT CGGGCCCACA CTGGGCGGCT GGCTGACCGA CAGCTACAAC TGGCGCTGGG TGTTCTTCAT CAACGTGCCG ATCGGCCTGT TCGCGTTGTT CGGCGTGCTG GCCTCGCTAC CGAACCGCAC CCCGGCGCGC AGCATGAGAT TCGACGCGTT CGGCTTCGCC ACGCTGAGTC TCGCTATCGG GGCGTTGCAG GCCATGCTGG ACCGCGGCGA ACAACTTGAC TGGTTCGGCT CGCTCGAAAT CCGCGTCGAG GCGCTGATCT GCGTGATCGC CTTCGCCTAC TTCCTGATCC ATACGGCCAC AGCCGGCGAA AAGTCGTTCT TCCGTTCCGC GCTGCTCAAG GACCGTAATT TCGTCACCGG GGCCTGTTTC ATCTTCGTGA TCGGCGCGGT CATGTATGCC ACCCGCGCGC TGCTGCCGCC GATGCTGCAG AACCTGATGG GCTATCCGGT GGCCACCACG GGGCTGGTTA CCGCGCCAAG CGGGCTGGGC ACGATGATCG CGATGATGCT GGCGGGCCGG CTGCTGCGGC GCGTGGATGC GCGGCTGCTC CTGTTGGCCG GCTTCCTGAT CTCCGCCTTC GCACTGTGGC AGATGATGGG CTACACCGTG GTGCTTTCGA TGTCGGATAT CGTCGTACCG GGCATCATCC AGGGCTTCGG CCTGGGGCTC GTGTTCGTAC CGCTGTCGGC GCTGACGTTC TCCACACTGG AGCCGTCCCT GCGCGCCGAT GGCACGGCCA CATACAGCCT GATGCGCAAT ATCGGCAGCA GCATCGGCAT CTCGCTGATC CAGACCATGA TGACCCGCAA CGCGCAGGTG GCGCACAGCG ACCTGGTCAC GCATATCAAC CCGTACAACC CGGCGCTGCA GTCGATGCTC ACGCATGGCT CGCGGATCGA CATCGCGGTG CTGAACCAGA CCATCAACCA GCAGGCAGCG ATGATCGCCT ATCTGAACGA CTTCAAGGCG ATGTTCATCG CCACGCTGGT GGTGGTGCCG CTGATCCTGT TGATCCGCCC CGGCGCGAAG CACGCCGACG ACAGCCTGGC GCACGCGGCG ATGGATTGA
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Protein sequence | MIIISTLINL RQPFQPPPMS SVVSGAAQPA ATPLNRPMIT LSIMLATLIQ TLDSTIANVA LPHMQGTLSA SQDEITWVLT SYIVAAAIAT PLTGWLSDQL GVKRLLAISI GGFTVASALC GMADSLTQIV AARLLQGVFG AALVPLSQSI LLDINPPSRQ GQAMAVWGMG VMVGPILGPT LGGWLTDSYN WRWVFFINVP IGLFALFGVL ASLPNRTPAR SMRFDAFGFA TLSLAIGALQ AMLDRGEQLD WFGSLEIRVE ALICVIAFAY FLIHTATAGE KSFFRSALLK DRNFVTGACF IFVIGAVMYA TRALLPPMLQ NLMGYPVATT GLVTAPSGLG TMIAMMLAGR LLRRVDARLL LLAGFLISAF ALWQMMGYTV VLSMSDIVVP GIIQGFGLGL VFVPLSALTF STLEPSLRAD GTATYSLMRN IGSSIGISLI QTMMTRNAQV AHSDLVTHIN PYNPALQSML THGSRIDIAV LNQTINQQAA MIAYLNDFKA MFIATLVVVP LILLIRPGAK HADDSLAHAA MD
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