Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1609 |
Symbol | |
ID | 4038412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1735391 |
End bp | 1737100 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637976993 |
Product | GntR family transcriptional regulator |
Protein accession | YP_583761 |
Protein GI | 94310551 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0318445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGCTC CGCGATGGGG ACATCGAAAA AAAACAGCAT CAGCACGGAT GGAAAATTAT CCGATGGTTG GTACCATCGG TAGGTCCATA TCCTGTTTTT TGCCCGGAGC CACTTTGAAA GAGACGATTC TTTCCGACCT GCTGCTTCAG CGACTTGAGC GCCCCGCTGG TGCAGTCACC GGCAAATCGG GCGAGCATAT GAACCGACAG CTCTACGCCA TCATCCGTCA GGAGATCCTT GCAGGTGCTG TGCCAGCGGG TAGCAAGCTG CCGGCGTCGC GCCTGCTGGC CAAGGAAATC GGTGTCTCGC GCAACACCGT CCTGTATGCG TACGAGCAGT TATTGGCCGA AGGCTATGTG ACCGCATCCA CCGGAAGTGG CACCTTCGTG TCGCATACCG TTCCCGACCA TCGTGCATTG CACAACGGGA GTGCGGCGAA TGGCACCATC ACTGTGCCCG CAGTGCAGCA ACACCCAAAC CGATTCGCGC TGTCGCGACG CGGGCAGCAT CTGGTGTCCC ACGCCAGCGC GTCGGATCGC CAATGGGGCG CGTTCGTCGC AGGCGTGCCT GATGTCTCGC TATTTCCACA CGCGGTCTGG GCGCGCCTGC TGAACAAGCA CTGGCGCAAT CCAAGCCCGC AGTTGCTGAC GTACGCGCAT CACGGCGGCT ACCTGCCGCT GAAGAAGCTG CTGGCCGAAC ACCTGCGTCT AGTGCGTTCC GTGCGCTGCG AGCCGGACCA GATCATCCTG ACCACCGGCA TCCACCAGGC CGTGGACCTG ACCACCCGGC TGCTGGCCGA CCCCGGCGAC AAGGCATGGA TGGAAGATCC CGGCTACTGG GGCACACGCA GCCTGCTGGC AAGCGCGGGC GTGGAGCCAA TCCCGGTACC GGTCGACGAT GAAGGGATCG CGCCAAGCCC CGCGACGCTA CAGAATCCGC CACGCTTCAT CTTCGTCACG CCTTCGCACC AGTATCCGCT TGGCATGATG ATGAGCCTCT CGCGCCGGCG CATGTTGCTC GAATACGCGC GGCAGCGCGG TGCATGGATC ATCGAGGACG ACTACGACAG CGAGTTCCGT TTCGAAGGCA GGCCGGTGGC GTCGTTGCAG GGGCTGGACG ACAACGATCG CGTGATCTAC ATGGGCACGT TCTCGAAGAC GCTCTTCCCG GGCATACGCA TGGGCTTCAT GGTGTTGCCC AAGCCGCTGG CGCCCCACTT CGCCACGGGG CTGTCCGAGC TCTATCGCGA AGGCCAGCTC GTGCAGCAGG CGGTGCTGGC GGACTTCATC GAGGAAGGCC ACTACGCCAC GCATATCCGT CGGATGCGCC AGCGGTACGC GCAGCGCCAG GCGCTGTTAC GCGAAGCCAT CGCCAACCGC TTCGGCGCCG ACTGGCCCAC ATCCACGCAT GAGGCCGGCC TGCACATGGT GATGCATCTG CCGCGCGGCG CCGATGATCT TGGCATCAGC ATGGCCGCGC GCACGCAGGG GCTATCGGCC CGGCCGCTTT CGCGCTACTA CAGCGAGGGG GCGGCGACGC AACAAGGGCT GCTGCTCGGC TACGCGTGCG TGCCCGAAGC CGAGATCGGT CCGGCCTTCC GCAAACTGGC CGAAGTCATC GAGCCGGCGC TGGAACATCT GGCGCGCACC CAGGAGCCGC CAAAACCGAT TGCCGCGAGG ATCAATGCAG AAGCGTGGAG CGGCGCTTGA
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Protein sequence | MGAPRWGHRK KTASARMENY PMVGTIGRSI SCFLPGATLK ETILSDLLLQ RLERPAGAVT GKSGEHMNRQ LYAIIRQEIL AGAVPAGSKL PASRLLAKEI GVSRNTVLYA YEQLLAEGYV TASTGSGTFV SHTVPDHRAL HNGSAANGTI TVPAVQQHPN RFALSRRGQH LVSHASASDR QWGAFVAGVP DVSLFPHAVW ARLLNKHWRN PSPQLLTYAH HGGYLPLKKL LAEHLRLVRS VRCEPDQIIL TTGIHQAVDL TTRLLADPGD KAWMEDPGYW GTRSLLASAG VEPIPVPVDD EGIAPSPATL QNPPRFIFVT PSHQYPLGMM MSLSRRRMLL EYARQRGAWI IEDDYDSEFR FEGRPVASLQ GLDDNDRVIY MGTFSKTLFP GIRMGFMVLP KPLAPHFATG LSELYREGQL VQQAVLADFI EEGHYATHIR RMRQRYAQRQ ALLREAIANR FGADWPTSTH EAGLHMVMHL PRGADDLGIS MAARTQGLSA RPLSRYYSEG AATQQGLLLG YACVPEAEIG PAFRKLAEVI EPALEHLART QEPPKPIAAR INAEAWSGA
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