| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1583 |
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| Symbol | |
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| ID | 4038386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1703543 |
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| End bp | 1704670 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976967 |
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| Product | asparaginase |
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| Protein accession | YP_583735 |
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| Protein GI | 94310525 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000246256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.508617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCA CTGCCCGTCT CAAACCCCTG GCCGCCCTGC TGCTTTCGGC CAGCCTGCTC
ACTGGCGTGG CTCACGCCCA GCTCAGCCCC GCACCGGCCG CCAGCGCCAA TGCGCCGGCA
GGCACCACCG CCGAAGCACG CAAGGCCAAC ATCGTCATCA TCGGCACTGG CGGCACCATC
GCCGGCGCGG GTGCTGCCGC CACCAATACC GCGGCCTATC AGTCCGCCGT GGTGCCGGTC
GACAAGATCA TCGCTTCCGT GCCGGAGATC TCGAAGATCG CCAACGTCAA GGGTGAACAG
GTCTTCCAGA TCGGCTCCGA GAGCTTCAAC AACGAGCGCC TGATCAAGCT GGCCAAGCGC
GTCTCCGAAC TGCTCAAGCA GCCCGACGTC GACGGCATCG TGATCACGCA CGGCACTGAC
ACGATCGAGG AAACCGCATA CTTCCTGAAC CTGACGCTCA AGAGCGACAA GCCGGTGGTG
GTGGTCGGCT CGATGCGCCC GGGCACCGCA CTGGGCGCCG ATGGCGCGCT GAACCTGTAC
GACGCCGTGC TGGTGGCGTC GAACCCCGCC TCGAAGGGCA AGGGCACGCT GGTGGTGCTC
AATGACGAGA TCCAGACCGG CCGTGACGTG ACGAAGACCA ACACGTTCAA GGTCGAGACG
TTCCGCTCGC CGTTTGGCCC GCTCGGCTAC GTGGTGGAAG GCCGCACGCT GTATTTCCGC
CTGCCGGCCC GGCCGCACAC GACGCAGACG GAGTTCGACA TCGACAAGAT CGACAAGCTG
CCTGAAGTGG CCGTGGTCTA CGCGTACGGC AACATGAACC CTGCCGCGAT CGATGCCGCT
GTGAAGAGTG GCGCCAAGGC CATCATCTTC GACGCCACCG GCAATGGTAG CGTCGGCGAC
TACATGGTCG AACCGCTCAA GGCCGCCCGT GCCAAGGGCG TGTTCATTGT GCGTGCCTCG
CGCACGGGCA GCGGCGTCGT GATCCGTAAC GGCGAACAGC CCGACGACAA GTACGACTGG
ATCGTCACCG ACGACCAGAT CGCGCAGAAG GCTCGCATCC TGATGGCGCT GGCACTGACC
AAGACCAACG ACCCGAAGGC ACTGCAAGAG ATCTTCTGGA AGTACTGA
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| Protein sequence | MQRTARLKPL AALLLSASLL TGVAHAQLSP APAASANAPA GTTAEARKAN IVIIGTGGTI
AGAGAAATNT AAYQSAVVPV DKIIASVPEI SKIANVKGEQ VFQIGSESFN NERLIKLAKR
VSELLKQPDV DGIVITHGTD TIEETAYFLN LTLKSDKPVV VVGSMRPGTA LGADGALNLY
DAVLVASNPA SKGKGTLVVL NDEIQTGRDV TKTNTFKVET FRSPFGPLGY VVEGRTLYFR
LPARPHTTQT EFDIDKIDKL PEVAVVYAYG NMNPAAIDAA VKSGAKAIIF DATGNGSVGD
YMVEPLKAAR AKGVFIVRAS RTGSGVVIRN GEQPDDKYDW IVTDDQIAQK ARILMALALT
KTNDPKALQE IFWKY
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