Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1541 |
Symbol | |
ID | 4038344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1661889 |
End bp | 1663628 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637976925 |
Product | formyl transferase-like protein |
Protein accession | YP_583693 |
Protein GI | 94310483 |
COG category | [I] Lipid transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00137712 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.223229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATAC TCTTCCTCAC CCACAGCTTC AACAACCTCA CCCAGCGCCT CTACGTGGAA CTCACCGGGC GCGGGCACGA GGTGTCCATC GAGTTCGACA TCGCCGACAG CGTGGCCGAG GAGGCCGTCG CGCTGTTCCG GCCGGATCTC ATCGTGGCGC CCTATCTGCG CCGGGCGATA CCCGAGTCCA TCTGGCGCCA GCACGTTTGC CTGGTGGTGC ATCCGGGCAT CGTCGGCGAT CGCGGTCCCT CGGCGCTGGA CTGGACGATC CAGGAGGGTG TGGATGAGTG GGGCGTCACG GTGCTGCAGG CCAACGGCGA GATGGATGCC GGCGACATCT GGGCCACCGA GACCTTTCCC ATGTGCCTGG CGAAGAAGAG CAGCCTCTAC CGCAACGAGG TGACGGCGGC GGCGACCCGC GCGGTGCTGG CGGCGGTCGG GCGCTACGCC GTGTATCGTT CCGGCGCATT CCGCCCGCGG CCGCTGGACT ATGCGGATCC AAACGTGCGC GGCCGGCTGC GTCCGCTCAT GAAGCAGGAA GACCGTAGCA TCGACTGGCA GCGCGAGAGC ACCGAGCAGG TGTTGCGCAA GCTCCACGCG GCGGACGGTT TCCCCGGCGT GCGCGACGAA CTGTTCGGCG TGCCCTGTCA TCTCTTCGAC GCCCATGCGG AGTACCGCCT GCGGGGCGAG CCGGGCGCGC TGCTGGGGCG GCGTGAGGGT GCAGTGCTGC GCGCCACGGT GGATGGCGCG GTGTGGATCG GCCATGCGAA GCGCGCCGAC CGCGATGATG CGCTGAAGCT GCCTGCCACC CTGGCCTTCG CCGAGGAGAC GAAGGATCTG CCCGAGTACA CCGTGCCCCT GTGGCGCGAA GAGGAGGGAG ACTGGAGCCC GCTGCGCTAC CATGAGGCCG GCGGCGTCGG CTACCTGCAT TTCGATTTCT ACAACGGCGC CATGGGCACG ACGCAATGCC AGCGCCTGCT CGCCGCCTAC GAGTTCGCGC GCAGCCGGTC CACGAAGGTC ATCGTGCTCC TGGGCGGTGC GGACTTCTGG TCCAACGGGA TCCACCTCAA TCTCATCGAG GCGGCGGACA GCGCCGCCGA TGAGTCCTGG CGCAACATCA ACGCCATCGA CGACGTGGCC CGTGCCGTCA TCGAGACCGG CGGCCAGCTC ACCGTCGCCG CGCTGCGCGG CAACGCCGGC GCCGGCGGCG CCTTCCTGGC GCTGGCGGCG GACGAAGTGT GGGCGCGCGA GGCGGCGATC CTCAACCCCC ACTACAAGAA CATGGGTAAC CTCTACGGCT CCGAGTACTG GACCTACCTG CTGCCCAGGC GGGTGGGCAT GGCGCGCGCC CGCGCCATCA TGCAGAACCG CCTGCCCCTC GGCGCCGCGG AAGCGGCGCG GGAAGGCGTG GTGGATGCCT GCCTGTCCGG CGACGTGGCG GCCTTCACCG TGCAGGTGGT GGCCCGTGCC GAAGCGCTGG CCGCTGCGGT GGACCTGGCA CAGCGGCTCG AGGAGAAGCG CGCGCGGCGC GTGCGCGACG AGGCCGTGAA GCCGCTGGCC GCCTATCGCG ACGAAGAGCT GGAACACATG CGGCGCAACT TCTACGGCTT CGATCCCAGC TATCACGTGG CGCGCTATCA TTTCGTGCGC CGCACGCCGC ACTCGTGGAC GCCGCGGCAT CTGGCCGCAC ACCGCGACAT CGATTGGGGG ACAGGCCGCC TGAAGGCCGT GAAGCCATGA
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Protein sequence | MRILFLTHSF NNLTQRLYVE LTGRGHEVSI EFDIADSVAE EAVALFRPDL IVAPYLRRAI PESIWRQHVC LVVHPGIVGD RGPSALDWTI QEGVDEWGVT VLQANGEMDA GDIWATETFP MCLAKKSSLY RNEVTAAATR AVLAAVGRYA VYRSGAFRPR PLDYADPNVR GRLRPLMKQE DRSIDWQRES TEQVLRKLHA ADGFPGVRDE LFGVPCHLFD AHAEYRLRGE PGALLGRREG AVLRATVDGA VWIGHAKRAD RDDALKLPAT LAFAEETKDL PEYTVPLWRE EEGDWSPLRY HEAGGVGYLH FDFYNGAMGT TQCQRLLAAY EFARSRSTKV IVLLGGADFW SNGIHLNLIE AADSAADESW RNINAIDDVA RAVIETGGQL TVAALRGNAG AGGAFLALAA DEVWAREAAI LNPHYKNMGN LYGSEYWTYL LPRRVGMARA RAIMQNRLPL GAAEAAREGV VDACLSGDVA AFTVQVVARA EALAAAVDLA QRLEEKRARR VRDEAVKPLA AYRDEELEHM RRNFYGFDPS YHVARYHFVR RTPHSWTPRH LAAHRDIDWG TGRLKAVKP
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