| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1540 |
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| Symbol | |
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| ID | 4038343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1660741 |
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| End bp | 1661790 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637976924 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_583692 |
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| Protein GI | 94310482 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000883886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.111823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG TGAAGAAAGG CTATATCCGG CCGCTGGATT TCAAGCACGG CCGCATTGAC
ATGAGCCACG GCGGCGGCGG GCGCGCCATG GCGCAGTTGA TCGACGAGCT GTTCCTGCGC
GCTTTCGACA ATGAGTGGCT GCGCCAGTTG AACGATCAGG CCTGTTTCGC CGTCACCACG
GGGCGCATGG TGATGGCCAC TGATGCCCAC GTGGTGTCGC CGCTGTTCTT CCCCGGCGGC
GACATCGGCG GCCTGTCGGT GCATGGCACC ATCAACGACG TGGCCATGGC CGGCGCCCGG
CCGCTCTACC TCGCCGCCAG CTTCGTCATC GAGGAGGGTT TTCCGCTGGC GGACCTGCGG
CGCATCGTGG ACTCCATGGC CCAGGCGTCG CAGGAAGCGC GGGTGCCCAT CATCACCGGT
GATACCAAGG TCGTCGAGCA GGGCAAGGGC GACGGTGTTT TCATCACTAC GACCGGCGTC
GGCGTCGTGC CCGAGGGCGT GAGTATCAGC GGCGAGCGGG CCCGGCCGGG CGACCGCATC
ATCGTCTCCG GTGCCATCGG CGACCACGGC ATGGCCATCA TGTCGCAGCG GGAGAACCTG
CGCTTCGACA CCGAGATCGT CTCCGACACC GCGGCCCTGC ACGGCCTGGT GACGGCGATG
GTGATGGCGG TGCCCGACAT CCACGTGCTG CGCGATCCCA CCCGCGGCGG CGTCGCCACC
ACGCTGAACG AGATCGCCCG GCAGGCCGGC GTGGGCATGA TGCTGGACGA GGCGGCGATT
CCGGTGAATC CGCAGGTGGC GGCCGCCTGC GAATTCCTTG GCCTGGATCC GCTTTACGTC
GCCAACGAGG GCAAGCTCGT CGCCATCTGC GCGGCGGGCG ATGCAGATCG ACTGCTGGAA
GTGATGCGTG CCCATCCCCT GGGGGCCCGC GCCGCCGTCA TCGGCGAAGT CACCGAAGAT
CCTCATCACT TCGTGCAGAT GAAGACCGCC TTCGGCGGAC GGCGCATCGT CGATTGGCTC
TCCGGTGAGC AGTTGCCGAG AATATGTTGA
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| Protein sequence | MSEVKKGYIR PLDFKHGRID MSHGGGGRAM AQLIDELFLR AFDNEWLRQL NDQACFAVTT
GRMVMATDAH VVSPLFFPGG DIGGLSVHGT INDVAMAGAR PLYLAASFVI EEGFPLADLR
RIVDSMAQAS QEARVPIITG DTKVVEQGKG DGVFITTTGV GVVPEGVSIS GERARPGDRI
IVSGAIGDHG MAIMSQRENL RFDTEIVSDT AALHGLVTAM VMAVPDIHVL RDPTRGGVAT
TLNEIARQAG VGMMLDEAAI PVNPQVAAAC EFLGLDPLYV ANEGKLVAIC AAGDADRLLE
VMRAHPLGAR AAVIGEVTED PHHFVQMKTA FGGRRIVDWL SGEQLPRIC
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