| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1536 |
|---|
| Symbol | |
|---|
| ID | 4038339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1655936 |
|---|
| End bp | 1656916 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637976920 |
|---|
| Product | hydrogenase accessory protein HypB |
|---|
| Protein accession | YP_583688 |
|---|
| Protein GI | 94310478 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0107781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0565242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTACCA TCTGCGGCTG CGGCGCCGGC GAAACCCGCA TCGAAGGCCA GGAACTGGAG
CATACGCACG AGCACGTGCA TGCCGACGGC ACCGTCCATG CCCATGCCCA CCCTCCTCAC
GAACAGGATC ACCATTACGC GGATCATGAC CACGACCACG CTCATGCCCA CCGCGCCGTG
CGCGGCACCG ACCATCTGCA CTACGGTCAC GGACCCGCTG GTGCCCATGC CCCAGGCATG
AGCCAGGCGC GGATGGTGAA AATCGAGCAG GACATCCTCG GCAAGAACAA CGCCTACGCG
GCGCAGAACC GCCGCTGGTT CGATGAGCAC GGCGTGTTCG CGCTGAACTT CGTCTCCAGC
CCCGGCTCCG GCAAGACCAC GCTGCTGGTG CGCACCATCG AGGCGCTGCA ATCCACCTGC
GGGCTGGCCG TCATCGAGGG CGACCAGCAG ACCTCCTTCG ACGCCGAGCG CATCCGCGCC
ACCGGCGTGC GCGCCCTGCA GATCAACACC GGCAAGGGCT GCCACCTGGA CGCCTACATG
GTAGGTCACG CCCTGGAGCA GCTGCGGCCG CAGGACGAGA GCGTGCTGCT GATCGAGAAC
GTGGGCAACC TGGTGTGTCC TTCCGCCTTC GACCTGGGCG AAGCCCACAA GGTGGTGATC
CTCTCCGTCA CCGAGGGGGA AGACAAGCCC CTCAAGTATC CGGACATGTT CCGGGCTGCC
AGCCTGATGT TGCTCAACAA GTGCGATTTG CTGCCGCACC TGTCCTTCGA CGTGGAGCGG
ACCATCGAGT ATGCCCGGCG CGTGAATCCC GCGCTGCACG TGATCCGCAC CTCGTCCACC
ACCGGTGAAG GCTTCGCCGA GTGGCTGGCG TGGATCACTG AAGGACTGGT CGGCCAGCGC
GCCAAGCGCA GCCAGAACGT GGACCTGCTG CGCGCCCGCG TCGCCGAGCT GGAAGCGGAG
CTGGCGGTGC TCAAGCGCTG A
|
|---|
| Protein sequence | MCTICGCGAG ETRIEGQELE HTHEHVHADG TVHAHAHPPH EQDHHYADHD HDHAHAHRAV
RGTDHLHYGH GPAGAHAPGM SQARMVKIEQ DILGKNNAYA AQNRRWFDEH GVFALNFVSS
PGSGKTTLLV RTIEALQSTC GLAVIEGDQQ TSFDAERIRA TGVRALQINT GKGCHLDAYM
VGHALEQLRP QDESVLLIEN VGNLVCPSAF DLGEAHKVVI LSVTEGEDKP LKYPDMFRAA
SLMLLNKCDL LPHLSFDVER TIEYARRVNP ALHVIRTSST TGEGFAEWLA WITEGLVGQR
AKRSQNVDLL RARVAELEAE LAVLKR
|
|---|
| |