| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1449 |
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| Symbol | rnhB |
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| ID | 4038252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1570802 |
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| End bp | 1571482 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637976833 |
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| Product | ribonuclease HII |
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| Protein accession | YP_583601 |
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| Protein GI | 94310391 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0164] Ribonuclease HII |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000143368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.271939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCGAA CGAAAGCTGC GGCTTCTAGC CAGTTGGGCC TGGAACTAAC TCAAACCGTT
GCTGTGGTGC AGCGCTTGTG TGGGGTAGAT GAGGCTGGGC GTGGCCCCTT GGCGGGTCCC
GTTTACGCTG CGGCCGTGGT ATTAAATCCC GCGCGGCAAA TCCGTGGCTT GGCCGACTCG
AAAATCCTCA GTGCGGAAAA ACGCGAGGCA CTGTTCGATC GCATCTGCGA CCACGCGCTG
GGATGGCATA TCGCATCCGC GTCGGTTGAG GAGATCGATT CGATCAATAT CCTCCACGCG
TCGATGCTTG CAATGCAACG GGCGGTGCAG GGCTTGGCCG CGAGCGGCGT CATTCCCGAT
CTCGTGCAGG TCGATGGTAA TCGTTGTCCG CAGGTAGCGT TCCCGGTCGA GGCTATCGTC
AAGGGCGATG CCAAGGTACG GGCAATTTCC GCGGCTTCGA TCCTGGCGAA GGTGGCGCGC
GATCGTGAAC TGTTGAAGCT GCACCAGGAG TACCCTGAGT ACGGGTTCGA CTCTCACTTT
GGCTATCCGA CGCCACAGCA TTTCACCGCG CTCGAACAAT TCGGCGCGAC GCCGCATCAT
CGGCGTTCGT TTGCGCCGGT GCGCAAGGTG CTTGAGCGTG GCATGGTACG CACCATGTCG
TCCGAAGCGC CGCCTTTCTG A
|
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| Protein sequence | MARTKAAASS QLGLELTQTV AVVQRLCGVD EAGRGPLAGP VYAAAVVLNP ARQIRGLADS
KILSAEKREA LFDRICDHAL GWHIASASVE EIDSINILHA SMLAMQRAVQ GLAASGVIPD
LVQVDGNRCP QVAFPVEAIV KGDAKVRAIS AASILAKVAR DRELLKLHQE YPEYGFDSHF
GYPTPQHFTA LEQFGATPHH RRSFAPVRKV LERGMVRTMS SEAPPF
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