| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1445 |
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| Symbol | lpxD |
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| ID | 4038248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1567183 |
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| End bp | 1568292 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637976829 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_583597 |
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| Protein GI | 94310387 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0157312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0519713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACAC CCACACTGGG TCAGCTCGCC ACCGAGAACG GCGCGCAGGT TGTGGGTGAT
CCCGACCTGG CCGTAGTCGG CCTGGCGCCG CTAGACCAGG CTGGTCCCGG CGACCTGTCT
TTCCTCTCCA ATCCGCTGTA TTTGCCACAG GCGCTCGCCT CGGCCGCAGG CGCCGTCATC
GTGTCGCCGG CAGACCTTGA ACGCATTCGT GCGGATGGGC AAGCCGAAGG GCGCAATTGG
CTGGTGGCAC GGAATCCCTA CGTCTGCTTT GCCCGTGTTG CGCAGCGCTT CGACCGCGCC
GCTAATGCCG ACTCACGTAC GGGGATCGAT CCCCGTGCCA GCGTGGCGCC CGATGCGGTG
GTCCCGGCAT CCTGTTTTAT CGGCCCGAAC GTGGTGATCG AGTCCGGCGC CCGGCTCGGC
GAGCGTGTTC GGATCCTCGC AAATGCCTTT ATCGGCGCAA GCGCGGAGAT AGGCGAAGAT
ACGCTCATCT ACGCCAATGT TTCTGTATAT CATCGTTGCG TGATTGGCGC GCGCAACATC
CTGCATAGCG GGGCGGTGAT TGGCGCAGAT GGCTTTGGTT TTGCGCCGGA CATCGGACCG
ACGGGTGTCG AGTACGTCAA GATTCCCCAG GTGGGACGCG CGGTGCTCGG CAATGACGTG
GAAATTGGCG CCAATACGGC CGTGGATCGT GGCGCGATGG CTGACACGGT GATCGAGGAC
GGCTGCAAGA TCGACAACCA GGTGCAGATC GCGCATAACG TGCATGTGGG TGCCCATACC
GTTATCGCGG GAACGGCTGC GGTTTCGGGT AGCACAAAGA TTGGCCGGTT CTGCGTGATC
GGCGGCGCGG CCAACTTTTC TGGCCATTTG AATATCGCTG ACCGGACCAC AGTGTCCGGC
GGTACGTCGA TTACCAAATC GATTACTAAA CCCGGTGGGC ATTACACGAG CGTGTTCCCG
TTCACGTCGC ATGGCGAGTG GGAGCGAAAC GCGGCAATCG TACGTGGCTT GTCAAAGCTG
CGCGAACGTG TCGTGCAACT GGAACGCAGG CAGCGCGGTG AAAACAACGC CCCCGCACAG
AACAAACAAG ACGAAGAGAA ATCATCATGA
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| Protein sequence | MKTPTLGQLA TENGAQVVGD PDLAVVGLAP LDQAGPGDLS FLSNPLYLPQ ALASAAGAVI
VSPADLERIR ADGQAEGRNW LVARNPYVCF ARVAQRFDRA ANADSRTGID PRASVAPDAV
VPASCFIGPN VVIESGARLG ERVRILANAF IGASAEIGED TLIYANVSVY HRCVIGARNI
LHSGAVIGAD GFGFAPDIGP TGVEYVKIPQ VGRAVLGNDV EIGANTAVDR GAMADTVIED
GCKIDNQVQI AHNVHVGAHT VIAGTAAVSG STKIGRFCVI GGAANFSGHL NIADRTTVSG
GTSITKSITK PGGHYTSVFP FTSHGEWERN AAIVRGLSKL RERVVQLERR QRGENNAPAQ
NKQDEEKSS
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