Gene Rmet_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1438 
Symbolfrr 
ID4038241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1559233 
End bp1559793 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content61% 
IMG OID637976822 
Productribosome recycling factor 
Protein accessionYP_583590 
Protein GI94310380 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.389466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000418835 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGTCG CCGACACTAA GAAGAGCGTC GAGCAGAAGA TGCAGAAGTC GATCGAAGCT 
TTCAAGGCCG ATCTGGCGAA AGTTCGTACC GGCCGCGCTC ATACCGGCTT GCTTGACCAT
GTTCAGGTGG ATTACTACGG CTCGATGGTG CCGATCAGCC AGGTGGCTGC AGTCAGCCTT
GCCGACGCCC GCACGATCTC CGTGCAGCCC TGGGAAAAGA AGATGGTCCA GGCTGTGGAA
AAGGCGATTC GCGACGGCGA TCTGGGCCTG AACCCGGCCA CGATGGGCGA CGTGATCCGC
GTGCCGATGC CCCCGCTGAC CGAAGAGCGC CGCAGGGAGC TGACCAAGGT CGTCAAGGGC
GAAGCCGAAG GCGCCAAGGT GGCCGTGCGC AACCTGCGCC GCGACGCCAA CGAGCAGTTC
AAGAAGCTGG TCAAGGACAA GGCAATTTCC GAGGACGACG AGCGTCGCGG TCAGGACGAA
GTGCAGAAGC TCACGGACAA GTTCGTGGCC GAAATCGACA AGCTCGTTGC CGAGAAAGAG
AAGGAGATCA TGACGGTGTA A
 
Protein sequence
MTVADTKKSV EQKMQKSIEA FKADLAKVRT GRAHTGLLDH VQVDYYGSMV PISQVAAVSL 
ADARTISVQP WEKKMVQAVE KAIRDGDLGL NPATMGDVIR VPMPPLTEER RRELTKVVKG
EAEGAKVAVR NLRRDANEQF KKLVKDKAIS EDDERRGQDE VQKLTDKFVA EIDKLVAEKE
KEIMTV