Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1435 |
Symbol | rpsB |
ID | 4038238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1556260 |
End bp | 1557003 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637976819 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_583587 |
Protein GI | 94310377 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000403005 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGTGA CTATGCGCGA AATGCTGGAA GCCGGTTGCC ACTTTGGCCA CCAGACCCGC TTCTGGAACC CGAAGATGGC CCCCTTCATT TTCGGTCACC GCAACAAGAT CCACATTATC AACCTCGAAA AGACCCTGCC GATGTTCCAG GACGCGCTGA AGTACGTGCG CCAACTGGCA GCAAACCGCG GCACCGTGCT TTTCGTGGGT ACCAAGCGTC AATCGCGCGA AATCCTGGCT GAAGAAGCTG GTCGCGCTGG CATGCCCTAC GTCGACGCCC GCTGGCTCGG CGGCATGCTG ACGAACTTCA AGACCGTCAA GATCTCGATC AAGCGCCTGA AGGACATGGA AGCCGCCAAG GAAGCCGGCG CGCTGGAAAC CATGAGCAAG AAGGAAGCGC TGATGTTCGA GCGCGAGATG GAAAAGCTGG AAAAGTCCAT CGGCGGCATC AAGGACATGG GTGGCATTCC TGACGCCATC TTCGTGGTGG ATGTCGGCTA CCACAAGATC GCCGTGACCG AAGCCAACAA GCTGGGTATC CCCGTGATCG GTGTGGTCGA CACGAACCAC TCGCCGGAAG GCATCGACTA CGTGATCCCG GGTAACGACG ACTCGAGCAA GGCTGTGGCC CTGTACGTGC GCGGCGTGGC CGACGCGATC CTGGAAGGCC GTGCAAACGC GGTTCAGGAA GTCGTGGAAG CCGCACGCGG CGACGACGAA TTCGTCGAAG TCCAGGAAGG CTGA
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Protein sequence | MSVTMREMLE AGCHFGHQTR FWNPKMAPFI FGHRNKIHII NLEKTLPMFQ DALKYVRQLA ANRGTVLFVG TKRQSREILA EEAGRAGMPY VDARWLGGML TNFKTVKISI KRLKDMEAAK EAGALETMSK KEALMFEREM EKLEKSIGGI KDMGGIPDAI FVVDVGYHKI AVTEANKLGI PVIGVVDTNH SPEGIDYVIP GNDDSSKAVA LYVRGVADAI LEGRANAVQE VVEAARGDDE FVEVQEG
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