| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1408 |
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| Symbol | |
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| ID | 4038211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1520900 |
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| End bp | 1522456 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976792 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_583560 |
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| Protein GI | 94310350 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00741999 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0556416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACC GCAAGGTTTC GTTCCGCCTG ATGGCCGGCG CCACCGCAGT GGGCGCCATG
GGCATGATGG CCGCCGCGCC GGCATTCGCC GCCAAGGACG CGGTGATGGC CGTGTACTCC
ACCTTCACCA CGCTGGACCC GTACGACGCG AACGACACGT TGTCGCAGGC GGCGGTGAAG
TCGTTCTACC AGGGCCTGTT CGGCTTCGAC AAGGACATGA AGCTGGTCAA CGTGCTGGCC
GAGAGCTACG ACGTCAGCAA GGATGGCCTG GTCTACACGA TCAAGCTCAA GAAGGGCGTG
AAATTCCACG ACGGCACCAC GTTCGACGCG ACCGCGGTCA AGGCCAATCT GGACCGCGTG
ACCGATCCGG CCAACAAGCT CAAGCGCTAC ACGCTGTTCA ACCGTGTGGC CAAGACCGAC
GTGGTGGACC CGAACACGGT GCGAATCACG CTCAAGGAGC CGTTCTCGCC GTTCATCAAC
GTGCTGGCCC ACCCGTCGGC GGTGATGATC AGCCCGACCG CGCTGAAGAA GTACGGCAAG
GAGATTGCCT TCCACCCCGT GGGCACCGGA CCGTTCGAGT TCGTGGAATG GAAGCAGACC
GATTACCTGA AGGGCAAGAA GTTCGCGGGC TACTGGAAGA CCGGCTATCC GAAGATCGAC
ACGATCACCT GGAAGCCTGT GGTCGACAAC AACACGCGCT CGGCCGTGAT GCAGACCGGC
GAGGCCGACT TCGCGTTCAG CATTCCGTTC GAGCAGGCCG CGGTGCTCAA GGCCAGCCCG
AAGGTGGACC TGATCGACGG GCCGTCGATC ATCCAGCGCT ACCTGTCGCT GAACACGATG
GTCAAGCCGT TCAACGACCC CAAGGTGCGC CAGGCGATCA ACTACGCGAT CAACAAGGAG
GCGCTGGCCA AGGTGGCGTT CGCCGGCTAC GCCGTACCGT CGGCCGGCGT GGTGCCACCG
GGCGTGGATT ACGCCGAGAA GCTGGGCCCA TGGCCGTACA ACCCGGCCAA GGCGCGCGAG
CTGCTCAAGG AAGCCGGCTA CCCGAACGGC TTCGAGACGA CGCTGTGGTC GGCCTATAAC
CACACCACCG CGCAGAAGGT GATCCAGTTC GTGCAGCAGC AGCTGCAACA GGTGGGCATC
AAGGCGCAGG TGCTGGCACT GGAAGCTGGC CAGCGCGTGG AACGCGTGGA GTCCGTGGCC
AAGCCCGAGG ACGCCGGCGT GCGCATGTAC TACGTGGGCT GGTCGTCGTC GACCGGTGAG
TCGGACTGGG CGCTGCGTCC GCTGCTGGCT TCGGAAGCGA TGCCGCCGAA GCTGCTGAAC
ACGGCCTACT ACAAGAACGA CCAGGTCGAT GCCGATATCG CCAACGCGCT GCGCACGACC
GATCGCGCCG AGAAGGCCAA GCTCTACAAG GACGCCCAGG AACAAATCTG GAAGGACGCG
CCGTGGGCCT TCCTGGTGAC CGAGAAGGTG CTGTACGCGC GTTCGAAGCG CCTGACTGGT
GCCTACGTGA TGCCCGACGG CTCGTTCAAC TTCGACGAGA TCGATATCAA GCAGTAA
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| Protein sequence | MSDRKVSFRL MAGATAVGAM GMMAAAPAFA AKDAVMAVYS TFTTLDPYDA NDTLSQAAVK
SFYQGLFGFD KDMKLVNVLA ESYDVSKDGL VYTIKLKKGV KFHDGTTFDA TAVKANLDRV
TDPANKLKRY TLFNRVAKTD VVDPNTVRIT LKEPFSPFIN VLAHPSAVMI SPTALKKYGK
EIAFHPVGTG PFEFVEWKQT DYLKGKKFAG YWKTGYPKID TITWKPVVDN NTRSAVMQTG
EADFAFSIPF EQAAVLKASP KVDLIDGPSI IQRYLSLNTM VKPFNDPKVR QAINYAINKE
ALAKVAFAGY AVPSAGVVPP GVDYAEKLGP WPYNPAKARE LLKEAGYPNG FETTLWSAYN
HTTAQKVIQF VQQQLQQVGI KAQVLALEAG QRVERVESVA KPEDAGVRMY YVGWSSSTGE
SDWALRPLLA SEAMPPKLLN TAYYKNDQVD ADIANALRTT DRAEKAKLYK DAQEQIWKDA
PWAFLVTEKV LYARSKRLTG AYVMPDGSFN FDEIDIKQ
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