Gene Rmet_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1362 
Symbol 
ID4038165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1471529 
End bp1472713 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content65% 
IMG OID637976746 
Productbeta-ketothiolase 
Protein accessionYP_583514 
Protein GI94310304 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTG AAGTGGTGGT TGTCAGCGGT GTGCGCACCG CAATCGGTAC CTTCGGCGGC 
AGCCTGAAGG ATCAGGCCCC GACGGATATG GGCGCTCTGG TCGTGCGCGA AGCACTGGCC
CGCGCCGGCG TTTCGGGCGA TGACGTGGGT CATGTGGTGT TCGGCAACGT GATCCAGACC
GAGCCGAAGG ACATGTATCT GGGCCGCGTG GCGGCTGTGA ATGGTGGTGT GTCGATCAAC
GCGCCGGCAC TGACCGTCAA TCGCCTGTGC GGCTCCGGCC TGCAGGCAAT CGTCAGCGCA
GCCCAGACGA TTCTGCTGGG CGATGCCGAC GTGGCAATCG GCGGCGGCGC GGAAAGCATG
AGCCGCGCGC CGTACCTGGC GCCGATGGCC CGCTGGGGTG CGCGCATGGG TGATGCCAAG
CTGGTCGACA TGATGCTTGG TGCACTGCAC GATCCGTTCC ACGCGATCCA CATGGGCGTG
ACGGCGGAAA ACGTCGCCAA GGAATATGAC ATTTCGCGCC AGCAGCAGGA CGAAGCCGCG
CTCGAATCGC ATCGTCGTGC TTCCGCCGCC ATCAAGGCAG GCTATTTCAA GGATCAGATC
GTTCCGGTTA CGCTGAAATC GCGCAAGGGC GACGTGGTGT TCGATACCGA CGAGCACGTG
CGTCACGATG CGACGATGGA CGACATGACC AAGCTCAAGC CGGTGTTCGT CAAGGAGAAT
GGCACGGTCA CGGCCGGTAA CGCCTCGGGC CTGAACGACG CCGCCGCCGC CGTGGTGCTG
ATGGAGCGTG CCGAGGCCGA GCGCCGCGGC CTGAAGCCGC TGGCTCGGCT GGTGTCCTAC
GGCCACGCCG GTGTCGATCC CAAGACGATG GGTATCGGTC CGGTGCCGGC TACGAAGATC
GCGCTGGAAC GTGCCGGCCT GACGGTCAAG GATCTCGATG TGATCGAGGC CAACGAGGCA
TTCGCGGCGC AGGCCTGCGC GGTGACCAAG GCTTTGGGTC TCGACCCGGC GAAGGTCAAC
CCCAATGGCT CCGGTATCTC GCTTGGCCAC CCGATCGGCG CCACCGGTGC GCTCATCACG
GTCAAGGCGC TGTACGAGCT GCAGCGTGTA CAGGGTCGCT ACGCGCTGGT GACGATGTGC
ATCGGTGGTG GCCAGGGCAT TGCCGCGATC TTCGAGCGCG TTTAA
 
Protein sequence
MAREVVVVSG VRTAIGTFGG SLKDQAPTDM GALVVREALA RAGVSGDDVG HVVFGNVIQT 
EPKDMYLGRV AAVNGGVSIN APALTVNRLC GSGLQAIVSA AQTILLGDAD VAIGGGAESM
SRAPYLAPMA RWGARMGDAK LVDMMLGALH DPFHAIHMGV TAENVAKEYD ISRQQQDEAA
LESHRRASAA IKAGYFKDQI VPVTLKSRKG DVVFDTDEHV RHDATMDDMT KLKPVFVKEN
GTVTAGNASG LNDAAAAVVL MERAEAERRG LKPLARLVSY GHAGVDPKTM GIGPVPATKI
ALERAGLTVK DLDVIEANEA FAAQACAVTK ALGLDPAKVN PNGSGISLGH PIGATGALIT
VKALYELQRV QGRYALVTMC IGGGQGIAAI FERV