Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1307 |
Symbol | |
ID | 4038110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1422721 |
End bp | 1424115 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637976693 |
Product | aromatic hydrocarbon degradation membrane protein |
Protein accession | YP_583461 |
Protein GI | 94310251 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.44634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0300258 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGATCA ATCAGAGTTG TGTCGCTGTG CGGGTGATCG TGGTTTTTTC GGTCGCGTTA TTTGCGATGG GCACTGCGAA GGCTACTGAC GTGTTCAATC TGGAGGGCTA TGGCCCCGTG TCCCGCGCCA TGGGGGGCAC AGGCGTGGCG TACGACATTG GCGCGGCCGC CATGATGACG AACCCGGCGA CGCTGGGCTT GATGGAGCAG GGGGCCTATC TAGATTTCGG GCTGGATGTC ATCAACACCG ATATCAACAT ACGAAACGCC GCCACCGGGG AATCAGTTTC TTCTGGCAAT CACGGCAACA ACAACGGCCC CTACTTCGCG CCCGAAGCCG CATTCGTGTA TCGGGCCGGG AAGTATGCAT TCGGCGTGGG GGCCTTCGCG GGAGGGGGAC TCGGCACGCA GTACGGCGGC AGCAGCTTTC TGTCGCGCAC GACCACCAAC GGCATCAACA CCGGCTTCGA CAATTTTTCG CGTCTCCTGG TGTTGCGCAT TCCGTTTGCC ATGTCTTACG ACGTCACGGA CAAGCTGACG GTCGGCGGCT CGCTCGACGC GGTCTGGACC TCGCTGAATC TCGGCATGCT GCTGGATGCC TCGCAGATCG GTACGCTCGC GGCCCAGCAC CGCGCGTCCG GCACGCTGCT GCCCGCGCTC GCCAGCGTGC CAGGCCTGTC GGGCGGGTAT ATCAACTCCG CGCATAACGG AATCGTGGGC GGCGGTGCCG ATGCCTGGGG GATCGGCGGC AAGCTGGGCC TCACGTATCG CCTCACGCCG GACACCGTGT TTGGCCTGGC CTACAACTTC AAGACGCGCG TGGGCGATCT GGGCGGCCAT GCAACGTTGT CGGCAGTAAG TTCCGTTGCC GGAAACATCC CGCTCGACGG TCAGATCACG GTCCACAGCT TCGAAATGCC CGCGCAGTTC ACGGCAGGTA TTAGTCACCG GTTAAACGAT CACTGGAGCG TTTCGGCCGA CTATCAGCGC GTGTTTCTCG CGAGCGTGTT CAAGGACATC AACGTGAGCT TCGTGCAGTC GGGCACGGGG GCGAACCTGA ACCTGTCGCT GCCGCAGAAC TACCGTGACA TCAACGTGTT TGGCGTGGGG GCGGAATACC GCTACAACGC GAGCCTCGCG TTCCGTGCGG GCTTCCATTA TGCGCAGGAA GCCATACCCA ACAATATGCT GTTGGCCGTC ATTCCCGCCA TCCCGACCAC GACCCTGACC GGCGGCGTCT CTTATGCGTT CAGCCAAAAC AGCAAGATCG ACCTCGGCAT ATCATTCGCA CTGCAGAAGA CCTTGACGAA CACGAGTCAG CCCAACACCT CCGTGCCGAT AAAGGTGACC CACTCGCAGA TCAACGCAGC GGTGGCCTGG CAAAAACGGT TTTGA
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Protein sequence | MKINQSCVAV RVIVVFSVAL FAMGTAKATD VFNLEGYGPV SRAMGGTGVA YDIGAAAMMT NPATLGLMEQ GAYLDFGLDV INTDINIRNA ATGESVSSGN HGNNNGPYFA PEAAFVYRAG KYAFGVGAFA GGGLGTQYGG SSFLSRTTTN GINTGFDNFS RLLVLRIPFA MSYDVTDKLT VGGSLDAVWT SLNLGMLLDA SQIGTLAAQH RASGTLLPAL ASVPGLSGGY INSAHNGIVG GGADAWGIGG KLGLTYRLTP DTVFGLAYNF KTRVGDLGGH ATLSAVSSVA GNIPLDGQIT VHSFEMPAQF TAGISHRLND HWSVSADYQR VFLASVFKDI NVSFVQSGTG ANLNLSLPQN YRDINVFGVG AEYRYNASLA FRAGFHYAQE AIPNNMLLAV IPAIPTTTLT GGVSYAFSQN SKIDLGISFA LQKTLTNTSQ PNTSVPIKVT HSQINAAVAW QKRF
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