| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1297 |
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| Symbol | |
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| ID | 4038100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1412448 |
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| End bp | 1414307 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976683 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_583451 |
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| Protein GI | 94310241 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0139093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCTT ACGAAACTCA AGGCTTCCGC ATGGACAACA CGGGCCGGCG CATCGTCGTC
GACCCGGTGA CCCGCATCGA GGGCCACTTG CGCTGCGAGG TCAACCTCGA CAGCAACAAC
GTGATCCGCA ACGCCGTCTC CACCGGCACC ATGTGGCGCG GGCTGGAGGT CATCCTCAAG
GGGCGCGACC CGCGCGACGC CTGGGCCTTC GTGGAGCGCA TCTGCGGCGT GTGCACCGGC
TGCCACGCGC TCGCCTCGGT GCGCGCGGTG GAGGACGCGC TGGGCATCCG CATCCCGCTC
AACGCGCACC TGATCCGCGA GATGATGGCC AAGACGCTGC AGGTGCACGA CCACGCGGTG
CACTTCTACC ACCTGCACGC GCTCGACTGG GTGGACGTGG TGTCGGCGCT GAACGCCGAC
CCGAAGAAGA CCAGCGATCT GCAGCACATC GTCTCGCCCT CGCACCCGAT GTCCTCGCCG
GGTTACTTCC GCGACGTGCA GAACCGCCTG AAGAAGTTCG TCGAGAGCGG CCAGCTCGGC
CCCTTCGCCA ATGGCTACTG GGGCTCCAAG GCTTACGTGC TGCCGGCCGA GGCCAACCTG
ATGGCGGTGA CCCATTACCT GGAGGCGCTG GACCTGCAGA AGGAATGGGT CAAGGTGCAC
ACCATCTTCG GCGGCAAGAA CCCGCACCCC AACTACATGG TGGGCGGCGT GCCCTGCGCG
ATCAACATCG ACGGCGACGG CGCGGCCGGC GCGCCCATCA ACATGGAGCG CCTGAACTTC
GTCGAGGCCC GCATCAAGGA GATGATCGAC TTCAACAACA ACGTCTACAT CCCGGACGTG
CTGGCCATCG GCACCCTCTA CAAACAGGCG GGCTGGCTCT ACGGCGGCGG GCTTTCCGCG
CTCAACGTGG CCGACTACGG CACCTACGAG AAGGTGCCCT ACGACCACAG CACGCACCAG
TTGCCGGGCG GCGTGATCCT GGACGGCGAC TGGAGCAAGA TCCACGAGAT CGACCCGCGC
GACCCGGAAC AGGTGCAGGA GTTCGTGACC CACTCCTGGT ACAAGTACGC CGATGAAAGC
CAGGGCCTGC ACCCCTGGGA CGGCGTGACC GAGGCGAACT ACCGGCCCGA AGGCCCGAAC
TTCAAGGGCA CGCGCACGAA GATCGAGCAG CTCGACGAAT CAGCCAAGTA CTCGTGGATC
AAGTCGCCGC GCTGGCGCGG CCACGCGGTC GAGGTCGGTC CGCTCTCGCG CTACATCCTG
GGCTACGCGC ACGCGCTGCA GGGCAACCAG TGGTGCCAGC GCGTCAAGCA GCAGGTGGAC
GAGGCGGCCA CTGCCATCAA CAGCGCCATC CCCAAGGCGC TGGGCCTGCC CGAGACGAAC
TACAGCGCCA AGCAACTGCT GCCCACCACC ATCGGCCGCA CGCTGGCACG GGCGCTGGAA
AGCCAGTACG CCGCCGAGAT GATGATGGAC GACTTCCGCC AGCTGGTGCA GAACATCAAG
GCCGGCGACA CGTCCACCGC CAACGTCGAG AAGTGGGACC CCAAGACCTG GCCCAAGGAG
GCCAAGGGCG TGGGCACGGT GGGCGCGCCG CGCGGCATGC TGGGCCACTG GATCCGGATC
AAGGATGGCA GGATCGAGAA TTACCAGTGC GTGGTGCCCA CCACCTGGAA CGGCTCTCCA
CGCGACCACA AGGGCCAGAT CGGCGCCTTC GAGGCCTCGC TGATGAACAC GCCCATGGTC
AACCCCGAGC AGCCGCTGGA GATCCTGCGC ACGCTGCACA GCTTCGACCC TTGCCTGGCT
TGCTCCACCC ACGTGATGAG CGAAGACGGC CAGGAGATGA GCCGGGTGAA GGTGAGATGA
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| Protein sequence | MGAYETQGFR MDNTGRRIVV DPVTRIEGHL RCEVNLDSNN VIRNAVSTGT MWRGLEVILK
GRDPRDAWAF VERICGVCTG CHALASVRAV EDALGIRIPL NAHLIREMMA KTLQVHDHAV
HFYHLHALDW VDVVSALNAD PKKTSDLQHI VSPSHPMSSP GYFRDVQNRL KKFVESGQLG
PFANGYWGSK AYVLPAEANL MAVTHYLEAL DLQKEWVKVH TIFGGKNPHP NYMVGGVPCA
INIDGDGAAG APINMERLNF VEARIKEMID FNNNVYIPDV LAIGTLYKQA GWLYGGGLSA
LNVADYGTYE KVPYDHSTHQ LPGGVILDGD WSKIHEIDPR DPEQVQEFVT HSWYKYADES
QGLHPWDGVT EANYRPEGPN FKGTRTKIEQ LDESAKYSWI KSPRWRGHAV EVGPLSRYIL
GYAHALQGNQ WCQRVKQQVD EAATAINSAI PKALGLPETN YSAKQLLPTT IGRTLARALE
SQYAAEMMMD DFRQLVQNIK AGDTSTANVE KWDPKTWPKE AKGVGTVGAP RGMLGHWIRI
KDGRIENYQC VVPTTWNGSP RDHKGQIGAF EASLMNTPMV NPEQPLEILR TLHSFDPCLA
CSTHVMSEDG QEMSRVKVR
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