Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1295 |
Symbol | |
ID | 4038098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1410945 |
End bp | 1411676 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637976681 |
Product | nickel-dependent hydrogenase b-type cytochrome subunit |
Protein accession | YP_583449 |
Protein GI | 94310239 |
COG category | [C] Energy production and conversion |
COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00118042 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.526274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCA CATCCCCTTC CGCACGCACC AGCGCCGCCG ATCACGACGC GCTGGAATTG CAGCGAGGCC AGACCATCAA GTCCGTCTAC GTGTACGAAG TGCCGGTGCG CCTCTGGCAC TGGATCAACG CGCTCGCCAT CACGGTCCTG TGCATCACCG GCTACTTCAT CGGCGTGCCG CTGCCGACCA TGCCGGGCGA AGCCAGCGCG AACTACCTCA TGGGCTACAT CCGTTTTGCG CACTTCGCGG CGGGCTACAT CATGGCCGTG GGCCTTCTGG GGCGGGCCTA CTGGGCGCTG GTGGGCAACC ACCACGCCAA GGAGCTGTTC TGGGTGCCGG TGTTTCAAAA GGCCTACTGG GTCCAGGCCT TCAACATGCT GCGCTGGTAC CTGTTCATGA TTCCCAAGCC GAACCAGTAC GTGGGCCACA ACCCGCTGGC GCGCTTCGCC ATGTTCTTCG TGTACCTGAT GCTGTCGGTG TTCATGGTCG TGACCGGCTT TGCGCTCTAC AGCGAAGGCG CGCAGGCCGG CTCCTGGCAA GACCACCTGT TCGGCTGGGT GATCCCGCTC ATGGGCCAGA GCCAGGACGT GCACACCTGG CACCGCCTGG GCATGTGGGG CATCGTGGTG TTCGTGATGC TGCACATCTA CGCGGCGATC CGGGAAGACA TCATGGGCCG CCAGAGCATC GTGAGCACGA TGATTTCCGG TCACCGCACG TTTAAAGAGT AA
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Protein sequence | MSATSPSART SAADHDALEL QRGQTIKSVY VYEVPVRLWH WINALAITVL CITGYFIGVP LPTMPGEASA NYLMGYIRFA HFAAGYIMAV GLLGRAYWAL VGNHHAKELF WVPVFQKAYW VQAFNMLRWY LFMIPKPNQY VGHNPLARFA MFFVYLMLSV FMVVTGFALY SEGAQAGSWQ DHLFGWVIPL MGQSQDVHTW HRLGMWGIVV FVMLHIYAAI REDIMGRQSI VSTMISGHRT FKE
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