Gene Rmet_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1251 
Symbol 
ID4038054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1373579 
End bp1374580 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content60% 
IMG OID637976637 
Productintegrase catalytic subunit 
Protein accessionYP_583405 
Protein GI94310195 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.093017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTGA GGCTGCACAA GAACGCCACC ACGACACCCA GGATCCGCGC CGAGATCCAG 
GTCAGCAAGG AGCCCATGAG GGTTCTGGCC CAGCGCTTTG GCGTGAGTGT CTCCACCATC
GCTCGCTGGA AGAAGCGTGC ATCGGTTCAT GACGCCTCCC ATACCCCTCA TCGACTGCAA
ACCACGCTGA CGCCGGCCCA GGAGTCCATC GTGCTCGTCT TGCGTAAAAG CCTGGGCCTT
TCGCTGGATG ACCTGCTGGC AGTCGTACGC GAGTTCATCC ATCCGACCGT CTCACGCGCT
GCCTTGCACC GCATGCTCAA ACGCCATGGA GTGTCGGCGC GCGAGGCATT GAGCGTGGAT
CGCCCCAGGA CCAAGCCGTT CAAGGCCTAC GAGCCCGGCT TCGTCCACAT CGATGTGAAG
TACCTGCCGC AGATGGCGGA CGAAACCACG CGGCGTTACC TGTTTGTGGC CATTGATCGC
GCCACCCGCT GGGTGTTCGT GCGTGTCTAT GCCAGCAAGA GCGCTACCAA CGCCCGGCGC
TTCCTGAAGG AATTGCACAA GGCCGCTGCC TTCCGTATCC GAACGATCCT GACCGACAAC
GGCAAGGAAT TCACGGATCG CTTCATCACA CGGGGAGAGC GTACGCCGAC CGGCAGGCAT
CAGTTCGATC AGCTCTGCGA GGAGCTAGGC ATTGAGCATC GCCTGACCCG CCCAAAACAC
CCGCAGACCA ACGGCATGGT TGAACGCTTC AACGGGCGCA TCGCCGACAT CCTGCGCACC
CATCACTTCC ATTCCGGCGA AGAACTTGAG GCCACCATCC TGCGGTATGT CTGGCTGTAC
AATCACCAAC TGCCACAGAA AGCCTTGGGG CATGTCAGCC CCATCCAGGC CATGAAACAA
TGGCAGCGAT CACACCCCGA ACTGTTCAAC AGACGTGTTA CCAATCAGCC GGGACACGAC
AACTACGCGC TACATCGCCC TCGTCGGAAC GTCATGGGTT AG
 
Protein sequence
MHLRLHKNAT TTPRIRAEIQ VSKEPMRVLA QRFGVSVSTI ARWKKRASVH DASHTPHRLQ 
TTLTPAQESI VLVLRKSLGL SLDDLLAVVR EFIHPTVSRA ALHRMLKRHG VSAREALSVD
RPRTKPFKAY EPGFVHIDVK YLPQMADETT RRYLFVAIDR ATRWVFVRVY ASKSATNARR
FLKELHKAAA FRIRTILTDN GKEFTDRFIT RGERTPTGRH QFDQLCEELG IEHRLTRPKH
PQTNGMVERF NGRIADILRT HHFHSGEELE ATILRYVWLY NHQLPQKALG HVSPIQAMKQ
WQRSHPELFN RRVTNQPGHD NYALHRPRRN VMG