| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1235 |
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| Symbol | |
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| ID | 4038038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1356779 |
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| End bp | 1359010 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976622 |
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| Product | helicase c2 |
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| Protein accession | YP_583390 |
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| Protein GI | 94310180 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0895293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.149585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGACC AATCGCGCCA CGCCTCAGGA AGTTCCAACT TGTCCGAACC GATCGAAGAC
ACATCCTTAT CCGACGGCCC CAATGTGGCC GGAGCCGCCG ACATGCCGGA GTCGCTCGCG
AACGCCGTTG CCGCGGCGGC AGCCGACCAG GCCGCGCTAA GGTCTTCGCA ACTCGCTACG
ATCTTTGCCG AAACCGGCAC GCTGGCCAGT GCGATCCCCG GCTACCGGCC GCGCGCGGCG
CAGGAGAAGA TGTCCGAGGC CGTGGCCAAT GCGATCGCCG ACAACGACAC GGTGATCGTC
GAGGCTGGCA CGGGTACGGG CAAGACGTAC GCCTATCTGG TGCCGGCCAT GCTCTGGGGC
GGGAAGGTCA TCCTTTCGAC CGGTACCAAG AACCTGCAGG ACCAGCTTTA CCTCCGCGAC
ATTCCGACGG TACGCCATGC GCTGAACGTG CCGATCTCCG TCTCCCTGCT CAAGGGGCGG
GCCAACTACG TTTGCCACTA TCACCTGGAG CGGGCACAGG CCAACGGCCG GCTGGCGTCG
AAGCAGGATG CGGCCTGGTT GCGCGAGATC AGCCGATTCG CCAAGACCAC GACGTCCGGG
GACAAGGCCG AGCTGGCCGA AGTACCCGAG AACGCGCCAG TGTGGCAGCT CGTGACGTCC
ACACGGGACA ACTGCCTGGG CAGCGAATGT CCGAACTACA AGGAATGCTT CGTGATGCGC
GCCCGCAAGG AGGCGCAGCA GGCCGACCTT GTGGTCGTCA ACCATCACTT GTTCTTTGCC
GACGTTGTGC TGCGCGATAC CGGCATGGCC GAATTGCTGC CCGCCGCCAA CACAGTGATC
TTCGACGAAG CGCACCAGTT GCCCGAGACG GCGACGTTGT TCTTCGGCGA AACGTTGTCG
ACGAGCCAAC TGCTCGAGCT GGCCCGTGAT ACCGTGGCCG AAGGGCTGTC GCACGCGCGC
GATGCGGTGG ACTGGGTCGC GCTTGGGGCA CCGCTCGAAC GGGCTGCCCG CGATCTGCGC
CTGGCTTTCG GCAGGGAGAA CGCCCGCCTT GCGCTGGGGC AGATCGACGC CGACCCGCGC
ATTCGCGAGC CGTTTCACGA AACGCTCGAC GCGCTCGACA CGGCGCTGTC CGACTTTGTC
GAGGCACTGG AATCGCAGGC CGAGCGTGCC GAGGAGCTTG AACAGTGCCA TCGCCGCGCG
CTCGAACTCG CCCAGCGGCT GGCGGCATGG CGCGACGACC GGATTGCCGC ATCCCCGGTG
CCTGCGGCCG AGCCGGCCGA CGATGCGGAA GGCGACCAGA CTTCCCAGTC TGTCCAACCT
GCCCAGCTTG GCCCCGAAAC CGTACGCTGG GTGGAAGTGT TCTCGCACAC GGTGCAGTTG
CATCGGACGC CGTTGTCGAT CGCGCCAATC TTCAGCCGGC AACGCGCAGG CCAACCACGC
GCGTGGGTCT TCACCTCTGC CACGCTGTCC GTGAAGGGCA ACTTCACCCA TTACGCCGCG
CAGCTTGGGC TGGATCGCGA TCGGTCGTTG ACACTGCCGA GCCCGTTTGA CTATGCGAAA
CAGGGGCTGC TGTATGTGCC CCGGGATATG CCACCGCCGC AATCGCCTCA ATTTACCGAG
GCGGTGGTGG AGCGGGCGCT GCCGTTGATC GAGGCGGCAG GTGGTCGCAC GTTCCTGCTT
TGCACCACGT TGCGGGCGGT GCAGAAGGCG TCGGACATGC TCTATGACCT GTTCGCTGAG
CGTGGTATCA ACCTGCCGCT GCTCGTGCAG GGCCAGGCGA GCCGTACCGA ATTGCTCGAC
CGCTTCCGCG AGCTTGGCAA TGCCGTGCTG GTGGGCAGCC AGAGTTTCTG GGAAGGCGTT
GATGTCCGTG GCGAGGCGCT GTCGCTGGTC ATCATCGACA AGCTGCCGTT CGCACCGCCC
GATGATCCAG TGCTGGCAGC GCGCATGGAA GTACTGCAGA AGAAGGGGCT CAGCCCGTTC
GCGGTTCACC AGCTTCCGCA TGCGGTGATC ACGCTGAAGC AGGGTGCTGG CCGACTGATC
CGGTCTGAGA CCGATCGCGG CGTGCTGGCG ATTTGCGATA CCCGGCTCGT GGAAAAGCCG
TATGGCCGGC AGATCTGGCA GAGTCTTCCG CCGTTCACGC GCACGCGAGA AGCCGACACC
GTCATTCGGT TCCTGGAAGG GTTGGGGCGA GGTGAGGCAC CGGCGTCCGA GTCCGACACG
GATTCGGAGT AG
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| Protein sequence | MRDQSRHASG SSNLSEPIED TSLSDGPNVA GAADMPESLA NAVAAAAADQ AALRSSQLAT
IFAETGTLAS AIPGYRPRAA QEKMSEAVAN AIADNDTVIV EAGTGTGKTY AYLVPAMLWG
GKVILSTGTK NLQDQLYLRD IPTVRHALNV PISVSLLKGR ANYVCHYHLE RAQANGRLAS
KQDAAWLREI SRFAKTTTSG DKAELAEVPE NAPVWQLVTS TRDNCLGSEC PNYKECFVMR
ARKEAQQADL VVVNHHLFFA DVVLRDTGMA ELLPAANTVI FDEAHQLPET ATLFFGETLS
TSQLLELARD TVAEGLSHAR DAVDWVALGA PLERAARDLR LAFGRENARL ALGQIDADPR
IREPFHETLD ALDTALSDFV EALESQAERA EELEQCHRRA LELAQRLAAW RDDRIAASPV
PAAEPADDAE GDQTSQSVQP AQLGPETVRW VEVFSHTVQL HRTPLSIAPI FSRQRAGQPR
AWVFTSATLS VKGNFTHYAA QLGLDRDRSL TLPSPFDYAK QGLLYVPRDM PPPQSPQFTE
AVVERALPLI EAAGGRTFLL CTTLRAVQKA SDMLYDLFAE RGINLPLLVQ GQASRTELLD
RFRELGNAVL VGSQSFWEGV DVRGEALSLV IIDKLPFAPP DDPVLAARME VLQKKGLSPF
AVHQLPHAVI TLKQGAGRLI RSETDRGVLA ICDTRLVEKP YGRQIWQSLP PFTRTREADT
VIRFLEGLGR GEAPASESDT DSE
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