Gene Rmet_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1231 
Symbol 
ID4038034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1351097 
End bp1353067 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content62% 
IMG OID637976618 
ProductK+ potassium transporter 
Protein accessionYP_583386 
Protein GI94310176 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0916765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.143534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCA GCCCGCCGGG TGAGCCGAAG TCAGGCCGTA GAGGCGCGAG CCGGTCCACC 
AGACCCAAAT CCATGACTCA ATCCACAACC AGTCACTACT ACGTCGAAAG CCCGAGCTCC
CGTGCGCTCG TGGTCGGCGC GATCGGTGTC GTCTTCGGCG ATATCGGCAC CAGTCCCCTT
TACTCGCTCA AGGAATGCTT CAGCCCGGAA CATGGCATTC CGTTCAGTCC CGATGCGGTA
CTCGGCATCA TCTCGATGCT GTTCTGGGCC TTTGTTATCG TCGTGTCGCT GAAGTACGTG
ATGTTCGTGA TGCGCGCCGA CAACAACGGC GAGGGCGGCA TTCTGGCGCT GATGGCGCTG
GCCTTGCGCA CAGCGGCGCC ACGGTCACGC ATGGCCAAGC TGATCATGAT GTTCGGCATC
TTCGGCGCGT GCATGTTCTA CGGCGACGCG GTGATCACGC CGGCCATCTC GGTGCTGTCT
GCCGTCGAAG GCCTGGAGAT TGCCGCGCCG GGGCTTTCCC ACTTCGTGAT TCCGATCACG
CTGCTGATCC TGGCCTTGCT GTTCTTTATC CAGCGCAGCG GCACGCATGT GGTGGGCAAG
CTGTTCGGGC CGATCATGGT GGTGTGGTTC CTGGCGCTCG GCGCGCTGGG CCTGATCCAT
TTGGTGCAGG CACCCGGGAT CGTCAAGGCC ATCAACCCGG TCTATGCGGT GTCATTCCTG
CATGACCACT CGCTCCAGGC GTTCATCGTG CTGGGTAGCG TGTTCCTGGT GCTGACTGGC
GCGGAGGCGC TCTACGCCGA TATGGGCCAC TTCGGCGCGA AGCCGATCCG CACGGCCTGG
TTCGTGCTGG TCATGCCGTG CCTGATCCTG AACTACTTTG GCCAGGGGGC AATGCTGCTG
GGCAACCCCG ACGCGATCGA AAATCCTTTC TACCTGATGG TGCCGTCGGC GCTGCAATTG
CCGATGGTGT TGCTGGCCAC CGCGGCCACG GTGATTGCGT CGCAGGCCGT CATCTCGGGA
GCGTTCTCGC TGACGAGCCA GGCCATTCAG CTTGGTTTCA TGCCGCGGAT GCGTATCCGC
TATACCTCGG CGGCGGAAAT CGGCCAGATC TATATGCCCG TGATCAACTG GATCCTGCTG
GTACTTGTGA TCTGCGTGGT GCTGGCGTTC AAGAAGTCCG ATAACCTGGC GGCCGCGTAC
GGGATCGCCG TGACCACGAC GATGGTGATC ACCACGTTCC TGGCCGCGCT GGTGATGCGC
AACGTCTGGA AGTGGAACCC TGCATTGGTG ACGCTGATCA GCCTGACGTT CCTGGTGGTC
GACATGTCGT TCTTCGCGGC CAACCTGCTC AAGATCGCCG AGGGCGGCTG GTTCCCGCTG
CTGATGGGCG GTAGCGCGTT CTTCCTGTTG ATGACCTGGC ACAGTGGCCG GAAGCTGCTG
CGCGCGCGTA GCCTGGAGGA TGGCATTCCG CTGGAGCCGT TTATCGCCGG CCTGCTGGCG
CACCCGCCGC ATCGCGTGGA AGGTACGGCC GTGTTCCTGA CCGGCAACAC CGAATCGGTG
CCGGTGTCGC TGCTGCACAA CCTCAAGCAC AACCGCGTGC TGCACGAGCG GGTGGTTTTC
CTGCAGTTCG TGACGCGTGA CATTCCGTAC GTGGACGACG ACGAGCGCCT GAGCTGCAAG
GATCTGGGGG GAGGCGTCTA CATCCTCAAG TCCGAATATG GCTTCAAGGA AACGCCTGAT
GTGCAGCGGG TTCTGGATCT GGCCCAGCGC AAGCTCGGCA TGCAATTCGA GCTGATGGAA
ACCTCATTCT TCATCGCGCG TGAATCGGTG ATTCCGTCGA AGCTGCCGGG TATGTCGATG
TGGCGCGAAA GCCTGTTCGC GTGGATGCAT CAGAACGGCG CCAAACCGTC GGACTTCTTC
TCGATTCCGG CCAACCGCGT GGTGGAGCTT GGGACGAAGG TAGAAATCTG A
 
Protein sequence
MPGSPPGEPK SGRRGASRST RPKSMTQSTT SHYYVESPSS RALVVGAIGV VFGDIGTSPL 
YSLKECFSPE HGIPFSPDAV LGIISMLFWA FVIVVSLKYV MFVMRADNNG EGGILALMAL
ALRTAAPRSR MAKLIMMFGI FGACMFYGDA VITPAISVLS AVEGLEIAAP GLSHFVIPIT
LLILALLFFI QRSGTHVVGK LFGPIMVVWF LALGALGLIH LVQAPGIVKA INPVYAVSFL
HDHSLQAFIV LGSVFLVLTG AEALYADMGH FGAKPIRTAW FVLVMPCLIL NYFGQGAMLL
GNPDAIENPF YLMVPSALQL PMVLLATAAT VIASQAVISG AFSLTSQAIQ LGFMPRMRIR
YTSAAEIGQI YMPVINWILL VLVICVVLAF KKSDNLAAAY GIAVTTTMVI TTFLAALVMR
NVWKWNPALV TLISLTFLVV DMSFFAANLL KIAEGGWFPL LMGGSAFFLL MTWHSGRKLL
RARSLEDGIP LEPFIAGLLA HPPHRVEGTA VFLTGNTESV PVSLLHNLKH NRVLHERVVF
LQFVTRDIPY VDDDERLSCK DLGGGVYILK SEYGFKETPD VQRVLDLAQR KLGMQFELME
TSFFIARESV IPSKLPGMSM WRESLFAWMH QNGAKPSDFF SIPANRVVEL GTKVEI