| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1213 |
|---|
| Symbol | |
|---|
| ID | 4038015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1332251 |
|---|
| End bp | 1333327 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637976599 |
|---|
| Product | dihydroorotate dehydrogenase 2 |
|---|
| Protein accession | YP_583368 |
|---|
| Protein GI | 94310158 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.104048 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTTCCGA CTCCTCGCCG GCCCTGGCCG CGCCCCACCC TCGTGCTCAA CGCGCTTTAC
CCCCTGCTGC GCCCCGCCCT GTTTTCCATG GATGCGGAGG ACGCCCACCA TTTCACGCTC
AATAACCTGA TGCGCGCCAA GCGCATGGGG CTGGCCGGAT GCATCGGCAA CAGCATCGCC
GACGACCCGC GCACGGTCAT GGGCGTTCGC TTTCCGAATC CAGTCGGCCT GGCGGCCGGC
CTGGATAAGG ATGGCGCCTA TATCGATGGC CTGGCGGCAT TCGGCTTCGG CTTCATCGAA
GTCGGTACGG TCACACCTCG GGCGCAGCCG GGCAACCCGC GCCCGCGCAT GTTCCGACTG
CCGCAGGCCG ACGCGCTAAT CAACCGCATG GGCTTCAACA ACGGGGGCGT CGATGCATTC
ATCCGAAATG TCCAGGCATC CCGCTGGAAG GCCGAAGGCG GTGTGCTGGG GCTCAATATT
GGCAAGAACG CCGATACGCC GATCGAGCGC GCGGCAGACG ATTACCTGTA CTGTCTTGAG
CGCGTCTATC CGCACGCAAG CTATGTCACG GTGAATATCT CATCGCCTAA CACGAAGAAC
CTGCGCCAGC TCCAGGGTGC CAGCGAACTC GATAGCCTGC TGTCCACACT CAAGGCTGCC
CAGCAGCGCC TGGCCGACCA GCACAAGCGC TACGTGCCCG TGGCGCTCAA GATCGCTCCC
GATCTCGACG ATGACCAGGT TCGCAACATC GGCGATGCGC TGGTGCGCCA CAAGATTGAC
GGCGTGATCG CCACAAACAC GACGATCTCG CGCGACGCCG TGAAGGGCCT GCCTCATGCC
GAGGAAGCTG GCGGCCTGTC CGGCCGGCCG GTGTTCGAAG CCTCCACGCG GGTGGTGCGC
GCGTTGCGTG AAGTCATTGG CGACGCGCTG CCGATCATCG GCGTGGGCGG CATCTTCAGC
GGCGCCGATG CGCGCGCCAA GATCGACGCC GGCGCGCAGC TCGTGCAGGT CTACAGCGGC
CTGATCTATC GCGGGCCGAC GCTGGTGCGC GAATGCGCCA GCGCCCTGCG CCGATAG
|
|---|
| Protein sequence | MVPTPRRPWP RPTLVLNALY PLLRPALFSM DAEDAHHFTL NNLMRAKRMG LAGCIGNSIA
DDPRTVMGVR FPNPVGLAAG LDKDGAYIDG LAAFGFGFIE VGTVTPRAQP GNPRPRMFRL
PQADALINRM GFNNGGVDAF IRNVQASRWK AEGGVLGLNI GKNADTPIER AADDYLYCLE
RVYPHASYVT VNISSPNTKN LRQLQGASEL DSLLSTLKAA QQRLADQHKR YVPVALKIAP
DLDDDQVRNI GDALVRHKID GVIATNTTIS RDAVKGLPHA EEAGGLSGRP VFEASTRVVR
ALREVIGDAL PIIGVGGIFS GADARAKIDA GAQLVQVYSG LIYRGPTLVR ECASALRR
|
|---|
| |