Gene Rmet_1211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1211 
Symbol 
ID4038013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1329883 
End bp1330854 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content63% 
IMG OID637976597 
Producthypothetical protein 
Protein accessionYP_583366 
Protein GI94310156 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0959108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGTC TCAAGGCATC CACCAAAACC ATCCTCGGCA GCGCAGTCGC GCTGGCTCTG 
CTCTACGGCG GCGCCGTGCA GGCTCAGACT GTGAAGGTCC TGTCGATCGT GGATCACCCG
GCACTTGACG CCATTCGTGA CGGCGTGCGC GACGAACTGA AGGCCAACGG CTACGACGCC
GACAAGAACC TGAAGTGGGA ATACCAGAGC GCCCAGGGCA ACACCGGCAC GGCCGCCCAG
ATCGCCCGCA AGTTCGTGGG TGACCAGCCG AACGTGATCG TGGCCATTGC CACGCCGTCG
GCGCAGGCCG TGGTGGCTGC CACCAAGTCC GTCCCCGTGG TGTATTCGGG CGTGACCGAT
CCGGTGGCTG CTCAGCTGGT CAAGAGCTGG GGCGCATCGG GCACCAATGT GACCGGCGTG
TCGGACAAGC TGCCGCTGGA CAAGCAGGTC GCCCTGATCA AGCGCGTGGT GCCCAAGGCC
AAGAACGTGG GCATGGTCTA CAACCCGGGT GAAGCCAACT CGGTGGTGGT GGTCAAGGAA
CTGAAGGAAC TGCTGGCCAA GGAAGGCCTG ACCCTGAAGG AAGCCGCCGC ACCGCGTACC
GTAGACATTG GCCCGGCCGC CAAGAGCCTG ATCGGCAAGG TGGACGTGAT CTACACGAAC
ACCGACAACA ACGTCGTGTC CGCATATGAA TCGCTGGTCA AGGTGGCCAA CGAATCGAAG
ATCCCGCTGG TGGCTTCGGA CACCGACAGC GTGAAGCGTG GCGCCATCGC CGCCCTGGGT
ATCAACTACG GTGACCTGGG CCATCAGACC GGCAAGGTCG TGCTGCGCAT CCTGAAGGGT
GAAAAGCCGG GCGCGATTGC TTCGCAAACC TCCGACAACC TTGAGCTGTT CGTGAACACG
GGCGCCGCCG AGAAGCAAGG CGTCACCCTG TCGCCGGACC TGATCAAGGA AGCCAAGACC
GTCATCAAGT AA
 
Protein sequence
MLRLKASTKT ILGSAVALAL LYGGAVQAQT VKVLSIVDHP ALDAIRDGVR DELKANGYDA 
DKNLKWEYQS AQGNTGTAAQ IARKFVGDQP NVIVAIATPS AQAVVAATKS VPVVYSGVTD
PVAAQLVKSW GASGTNVTGV SDKLPLDKQV ALIKRVVPKA KNVGMVYNPG EANSVVVVKE
LKELLAKEGL TLKEAAAPRT VDIGPAAKSL IGKVDVIYTN TDNNVVSAYE SLVKVANESK
IPLVASDTDS VKRGAIAALG INYGDLGHQT GKVVLRILKG EKPGAIASQT SDNLELFVNT
GAAEKQGVTL SPDLIKEAKT VIK