Gene Rmet_1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1207 
Symbol 
ID4038009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1326356 
End bp1327768 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content64% 
IMG OID637976593 
ProductIron-sulfur cluster binding protein 
Protein accessionYP_583362 
Protein GI94310152 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.112405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCC ACAGCATGGA ATTCAAGGCG CGCGCAGGGC AGAAGCTTGC CGACCAGCGC 
CTGCAGCAGA ACCTCAAGAA GCTCTCGACC AAGTTCGTCA CCGCGCGCGC CGATGCGATC
CGCGACATCG ATTTCGATGC CACGCGCGCC GCGTTGAAGG AGCGGCGCAA CCGGGCGCTC
GAGAATCTCG ACGTCTGGCT GGCCAAGTTC GAGGAGAGCG CGACAAAGCG TGGCGCCACG
GTGTTGTTTG CCGAATCGAC CGCCGATGCC GCGAGGCTAG TGGGCGAAAT CGCGCAAAAG
CATGGCGTGA AGAAGGTCAT CAAGAGCAAG TCGATGGTGA CCGAGGAGAT GCGTCTGAAC
CAGGTGCTTG GCGAGATGGG CGTGCAGAGC ATCGAGACCG ACCTCGGCGA GTACATCCTG
CAGATCAACG ATGCCGAGCC GCCGTCGCAC ATCATTGCGC CGGTGATCCA CAAAGACAAG
GACGAGATTG CCGACCTGTT CGCCAAGGTC CATAACAAGC CCCGTCTGAC TGATATCCCC
GAGATGACGC GCGAAGCGCG CGAGGTGCTG CGGCCAGAGT TCCTGTCCGC CGACATGGGC
GTCACGGGCG GGAATTTCAT CATCGCCGAG ACCGGCTCGG TGGCCGTGGT CACCAACGAA
GGCAATGAGG GCATGTGCAC GATCATGCCG CGCGTGCACG TGGCCGTGAC CGGTATCGAG
AAAGTCCTGC CGACGCTGGA GGATCTGGCC ACCGTGATGC GGCTGCTGCC GCGTTCGGCA
ACGGGGCAGG CGATCTCGAA CTATTTTTCG CTGCTGACTG GGCCGCGTGC CGAGGGCGAG
CAGGACGGTC CGGAGCATAT GTACTTCGTG CTCGTCGATG GTGGACGCAG CGGCCTGATC
GGCGGAGAGT TCCAGGAGAT GCTGCGCTGC ATCCGCTGCG GCGCCTGCAT GAACCACTGC
CCCGTGTACC AGAAGATCGG CGGGCACGCC TATGGCTGGG TTTATCCGGG CCCGATGGGC
AGCGTGCTGA CGCCGAGTTA CGTTGGGCTG GCGAATGCCC TGGACCTGCC GCAGGCAGCC
ACGCTGTGCG GCGAATGCAA CCGCGTCTGT CCGGCGTCGA TCCCGCTGTC CGATCTGCTG
CGCAAGCTGC GCGAGAAACA GATGGAGCGA CGCCTGCGTC CCTGGCAGGA GCGGGCGGCA
CTGCAGGCTT GGGGTTTTAT TGCACGACGC CCGGATCTGT ACGCGTTTGT CACGCGTATG
GGTGCGCGCC TGCTCGCACG CATGGGCGGC CGTGGAAAGC TGATCGGGAG CCTGCCGATG
GCGGGCAAGG GGTGGACGGA CACACGTGAC ATGCCGGCCC CGAGCGGCCG AACGTTCCGC
GAACTTTACA AGGAAAGGAG GGCGCGTTCA TGA
 
Protein sequence
MQVHSMEFKA RAGQKLADQR LQQNLKKLST KFVTARADAI RDIDFDATRA ALKERRNRAL 
ENLDVWLAKF EESATKRGAT VLFAESTADA ARLVGEIAQK HGVKKVIKSK SMVTEEMRLN
QVLGEMGVQS IETDLGEYIL QINDAEPPSH IIAPVIHKDK DEIADLFAKV HNKPRLTDIP
EMTREAREVL RPEFLSADMG VTGGNFIIAE TGSVAVVTNE GNEGMCTIMP RVHVAVTGIE
KVLPTLEDLA TVMRLLPRSA TGQAISNYFS LLTGPRAEGE QDGPEHMYFV LVDGGRSGLI
GGEFQEMLRC IRCGACMNHC PVYQKIGGHA YGWVYPGPMG SVLTPSYVGL ANALDLPQAA
TLCGECNRVC PASIPLSDLL RKLREKQMER RLRPWQERAA LQAWGFIARR PDLYAFVTRM
GARLLARMGG RGKLIGSLPM AGKGWTDTRD MPAPSGRTFR ELYKERRARS