| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1199 |
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| Symbol | |
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| ID | 4038001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1317732 |
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| End bp | 1319510 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976585 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_583354 |
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| Protein GI | 94310144 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000025561 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.645323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGA TCGAAGTCAA GGTGCCGGAT ATCGGCGATT TCGACGCGGT GGAAGTGATC
GAGGTGCTGG TCAAGGCTGG CGACACGGTC GAGGAAGAAC AGTCGCTGAT CGTGCTGGAG
TCCGACAAGG CCAGCATGGA AGTGCCGTCG TCGGCCGCCG GCAAGGTCGT GGACGTCAAG
GTCAAGGTGG GCGACAAGGT CGCGAAGGGC ACGCTGATCT GCACCGTCGA AGGTGGCGCG
GCGGCGGCTC CTGCCCCGGC GCCGGCGGCG GCGCCCAAGC CCGCGGCTGC GCCTGCTCCG
GCGCCGGCAG CGGCTCCGGC GGCCGCCACG CATGCCGGTG GCGCCGACAT CCAGTGCGAA
ATGCTGGTGC TGGGCGCAGG CCCCGGGGGT TACTCGGCGG CTTTCCGCTC GGCGGACCTC
GGCATGAACA CCGTTCTGGT CGAGCGCTAT GGCACCCTGG GCGGCGTTTG CCTGAACGTG
GGCTGCATCC CGTCGAAGGC GCTGCTGCAC AACGCGGCGG TGATCGACGA GGCCAAGGCA
CTGGCCGCGC ACGGCATCCT GTTCGGCGAA GCCAAGATCG ATCTGGATGG CCTGCGGCAC
TACAAGGAAA GCGTGGTCGG CAAGCTGACC GGCGGTCTGT CGGGAATGGC GAAGGCCCGC
AAGGTGCAGG TGGTGCGCGG CATCGGCACG TTCCTGGATC CGCATCATCT GGAAGTGCAG
GAAACGGAAG GCGACAGCAA GGCCACCAAT GGCAAGAAGA CCGTGATCCG CTTCGAAAAG
GCGATCATCG CGGCTGGCAG CCAGGCCGTG AAGCTGCCGT TCGTCCCTGA GGATCCGCGC
ATTTTCGATT CGACGGGCGC GCTGGAACTG CGCGACATCC CGAACAAGAT GCTCGTGATT
GGCGGCGGCA TCATCGGCCT GGAAATGGCC ACTGTCTACA GCACGCTCGG CGCGCGACTC
GATGTCGTGG AAATGCTCGA CGGCCTGATG CAGGGCGCTG ACCGCGATCT GGTCAAGGTC
TGGGACAAGG TGAACAAGCA TCGCTTCGAT AACGTGATGC TGAAGACCAA GACTGTCGGC
GTGGAAGCGA AGCCGGATGG CATCTACGTG AAGTTCGAGG GCGAGTCCGC GCCGGCCGAG
CCGCAGCGTT ACGACGCCGT GCTGGTGTCG GTGGGCCGTT CCCCGAACGG CAAGAAGATC
GGTGCCGAGA AGGCCGGTGT AGCAGTGACC GACCGTGGCT TCATCGATGT CGACAAGCAG
ATGCGCACCA ATGTGCCGCA CATCTACGCG ATCGGCGATA TCGTCGGCCA GCCGATGCTT
GCACACAAGG CGGTGCATGA GGCACATGTG GCCGCCGAAG CCGCGCATGG CGAGAAGGCC
TACTTCGACG CGAAGCAGAT CCCGTCCGTG GCGTTCACCG ATCCGGAAGT GGCATGGGCC
GGCAAGACCG AAGACCAGTG CAAGGCCGAA GGCATCAAGT ACAGCAAGGG TGTGTTCCCG
TGGGCCGCTT CGGGCCGCGC GATCGCCAAT GGGCGTGACG AAGGCTTCAC CAAGCTGATT
TTCGACGAGG AAACCCATCG CATCATCGGT GGCGGTATCG TCGGCACCCA CGCGGGCGAC
CTGATCAGCG AAGTCTGCCT GGCCATCGAG ATGGGCGCGG ATGCCGTGGA TATTGGCAAG
ACGATTCACC CGCACCCGAC CTTGGGCGAG TCGATTGGCA TGGCTGCGGA AATCTACGAA
GGTGTGTGCA CCGACGTGCC GCCGCCGCGC AAGCGCTGA
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| Protein sequence | MSVIEVKVPD IGDFDAVEVI EVLVKAGDTV EEEQSLIVLE SDKASMEVPS SAAGKVVDVK
VKVGDKVAKG TLICTVEGGA AAAPAPAPAA APKPAAAPAP APAAAPAAAT HAGGADIQCE
MLVLGAGPGG YSAAFRSADL GMNTVLVERY GTLGGVCLNV GCIPSKALLH NAAVIDEAKA
LAAHGILFGE AKIDLDGLRH YKESVVGKLT GGLSGMAKAR KVQVVRGIGT FLDPHHLEVQ
ETEGDSKATN GKKTVIRFEK AIIAAGSQAV KLPFVPEDPR IFDSTGALEL RDIPNKMLVI
GGGIIGLEMA TVYSTLGARL DVVEMLDGLM QGADRDLVKV WDKVNKHRFD NVMLKTKTVG
VEAKPDGIYV KFEGESAPAE PQRYDAVLVS VGRSPNGKKI GAEKAGVAVT DRGFIDVDKQ
MRTNVPHIYA IGDIVGQPML AHKAVHEAHV AAEAAHGEKA YFDAKQIPSV AFTDPEVAWA
GKTEDQCKAE GIKYSKGVFP WAASGRAIAN GRDEGFTKLI FDEETHRIIG GGIVGTHAGD
LISEVCLAIE MGADAVDIGK TIHPHPTLGE SIGMAAEIYE GVCTDVPPPR KR
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