| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1189 |
|---|
| Symbol | |
|---|
| ID | 4037991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1303315 |
|---|
| End bp | 1304112 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637976575 |
|---|
| Product | exodeoxyribonuclease III |
|---|
| Protein accession | YP_583344 |
|---|
| Protein GI | 94310134 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.642421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCG CAAGCTGGAA CGTCAACTCC CTCAAGGTAC GTCTGCCGCA GGTGCTGCAA
TGGCTAGGCG CGCAGGATGC CGCGGGCACG CCGATCGATG CGCTGTGCCT GCAGGAACTA
AAGCTGCCCG ACGACAAGTA CCCGCTGGCC GAACTCCAAG CGGCCGGCTT CCATAGCATC
TTCACAGGTC AGAAAACCTA CAACGGTGTG GCGATCCTGG CACGCAACGC GGCCATGCCC
GTGCCGACTG ACGTGGTGCG CAACATTCCC GGCTATGAGG ATGCGCAGCA ACGCGTGATC
GCCGGCACGT ACGGCGACGT ACGTCTGATT AGCGCGTACT TCCCGAATGG CCAGGCGCTG
GACTCGGACA AGTTCGTCTA CAAGCTCGAC TGGCTCAAGG CCATGATCGA GTGGCTGCGC
GCCGAAATGA CCCGGTATCC GAAACTCGCG CTGCTGGGAG ACTTCAACAT CGCCCCGGAA
GACCGCGACG TCCACGACCC GGCCAAGTGG GAGGGCCAGA ACCTGGTCTC GCCGCAGGAG
CGCGACGCGT TCCAGACATT GATCGGCCTG GGTCTGGTTG ACTCCTTCCG CATGTTCGAA
CAGCCCGAGA AAATGTTCTC GTGGTGGGAT TACCGAATGA TGGGTTTCCG CCGCAATGCC
GGGTTGCGTA TCGACCATAT CCTGCTTTCG GCCGACCTGG CGCGGCAGTG CGCGACGTGT
GTCATCGACA AGGAGCCGCG CCGCTGGGAG CAGCCGTCTG ACCACACCCC TGTCGTGGCC
ACGCTCACGC TCGGCTAG
|
|---|
| Protein sequence | MRIASWNVNS LKVRLPQVLQ WLGAQDAAGT PIDALCLQEL KLPDDKYPLA ELQAAGFHSI
FTGQKTYNGV AILARNAAMP VPTDVVRNIP GYEDAQQRVI AGTYGDVRLI SAYFPNGQAL
DSDKFVYKLD WLKAMIEWLR AEMTRYPKLA LLGDFNIAPE DRDVHDPAKW EGQNLVSPQE
RDAFQTLIGL GLVDSFRMFE QPEKMFSWWD YRMMGFRRNA GLRIDHILLS ADLARQCATC
VIDKEPRRWE QPSDHTPVVA TLTLG
|
|---|
| |