Gene Rmet_1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1184 
Symbol 
ID4037984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1296746 
End bp1297816 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content63% 
IMG OID637976568 
Producthypothetical protein 
Protein accessionYP_583339 
Protein GI94310129 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000425301 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.947085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTCG ACGCACATCA CGGAACGAAG TTCCGTATTG CGGAACCAGC ACAACTAGCA 
ACACGTACTA GCAACACCTG GAGGCATCTT TTGAAAGCAG TTCTGAATAC GGGCGCCATC
GCCGCCCTCG CCGTCCTCGG CCTGACCCAG ACCGGCATCG CCCACGCGCA AGCGTATCCG
ACCAAGCCGA TCCGCCTGAT CGTGCCATTC GCCGCCGGCG GTACCACGGA TATCGTTGGC
CGCGCCGTGT CCGATGCGAT CGGCCGTGAA CTGGGTCAGC CAGTGGTGGT GGAAAACCGC
GGCGGCGGCG GCGGCGCGAT CGGCGCCGAT GCGCTGGCCA AGTCCGCGCC TGATGGCTAT
ACGCTGGGTA TCGCCACGGT CAGCACGATG GCTACCAATC CGGCCACCAA CCCCAAGAAC
CCGTACGACC CGATCAAGGA CTTCGCGCCG ATCACCAACC TGGTGAACGT GCCGAACGTG
CTGACCGTGA ACCCGAAGGT GCCCGCAAAG AACCTGAAGG AGTTCATTGC CCTGGTGAAA
TCGAACCCCG GCAAGTACAG CTATGCGTCG GCTGGCAAGG GCAGCATCTC GCACCTGGAT
GGCGAGCTGT TCAAGTACAT CACCAAGACC GATATGGTCC ACATCCCGTA CCGTGGATCG
GGCCCGGCGC TGAATGACAC GCTGGCCGGA CAGGTCAACG CGCAGTTCGA CAACCTGCCG
TCGTCGATGC CGTTCATCCA GAGCGACAAG CTGCGCGCCC TGGCCGTCGC CGCGCCGAGG
CGCGTGGAAG GCCTGCCCAA CGTGCCGACG TTCGCGGAAG AAGGCATGAA GGACATGAAC
AACATGGCCT GGTATGGCCT GGTGGCCCCG GCGGGCACCC CTGCTGCCAT CATCACCAAG
GTGCACGATG CGGCGGTCAA GGCCCTGCAG GATCCCAATG TGAAGAAGCG TCTGCACGAC
GCCGGTGCCT ACCCCGACGG CAACACGCCG CAACAGTACG CGGCACAGAT CAAGCGTGAA
CTGGAACTGC GCAAGAAGAT CGCCGTCGAT CAGAACATTA CCCTGGAGTA A
 
Protein sequence
MPVDAHHGTK FRIAEPAQLA TRTSNTWRHL LKAVLNTGAI AALAVLGLTQ TGIAHAQAYP 
TKPIRLIVPF AAGGTTDIVG RAVSDAIGRE LGQPVVVENR GGGGGAIGAD ALAKSAPDGY
TLGIATVSTM ATNPATNPKN PYDPIKDFAP ITNLVNVPNV LTVNPKVPAK NLKEFIALVK
SNPGKYSYAS AGKGSISHLD GELFKYITKT DMVHIPYRGS GPALNDTLAG QVNAQFDNLP
SSMPFIQSDK LRALAVAAPR RVEGLPNVPT FAEEGMKDMN NMAWYGLVAP AGTPAAIITK
VHDAAVKALQ DPNVKKRLHD AGAYPDGNTP QQYAAQIKRE LELRKKIAVD QNITLE